iterations/neb0_image05_iter7.sci output for 43: 3.6A-->1.6A 715(amd-3) Si-CH2H...H2HC-Si two dimer closed (TSS)
Status: finished#MD System 2.0 @Title neb0_image05 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.356643086155 0.540594698721 0.42272214144} C1 1 1 14 {} {0.337608172805 0.50758842262 0.53374896925} Si1 2 1 14 {} {0.411790618543 0.582929568488 0.418447689339} Si2 3 1 8 {} {0.340849827606 0.56784329813 0.609002625338} O1 4 1 8 {} {0.284622137535 0.485620607535 0.525821078075} O2 5 1 6 {} {0.369245276576 0.43162259117 0.569155935813} C2 6 1 6 {} {0.460754179936 0.525534432528 0.412159381968} C3 7 1 8 {} {0.413493898172 0.627102359509 0.513634418399} O3 8 1 8 {} {0.412177023309 0.63366979887 0.330652619661} O4 9 1 14 {} {0.232342956507 0.49122255472 0.556404041536} Si3 10 1 7 {} {0.212714306975 0.412478625606 0.587865506421} N1 11 1 14 {} {0.176678537579 0.408156519621 0.679733095744} Si4 12 1 14 {} {0.228317742087 0.34247172386 0.523885750279} Si5 13 1 7 {} {0.229519514419 0.35489257141 0.410302845109} N2 14 1 7 {} {0.12915853325 0.456490784368 0.672533597102} N3 15 1 1 {} {0.356199544512 0.500165195737 0.37267370704} H1 16 1 1 {} {0.331710607314 0.577739505509 0.400704327848} H2 17 1 1 {} {0.364641634995 0.600010154765 0.595953210259} H3 18 1 1 {} {0.365920107651 0.390621252112 0.520661258116} H4 19 1 1 {} {0.356571804081 0.413559596404 0.633654217539} H5 20 1 1 {} {0.404962910929 0.442595434933 0.577439298884} H6 21 1 1 {} {0.492696159048 0.552785838544 0.411519712186} H7 22 1 1 {} {0.459443053178 0.49469054641 0.351369383831} H8 23 1 1 {} {0.461744000844 0.491379133283 0.469540135084} H9 24 1 1 {} {0.438729424198 0.656446052269 0.523877440718} H10 25 1 1 {} {0.440549772435 0.642433148573 0.301976734841} H11 26 1 1 {} {0.226574391512 0.536863065077 0.634426297185} H12 27 1 1 {} {0.206835261263 0.5177715658 0.478702491856} H13 28 1 1 {} {0.163789762758 0.336449064671 0.687851264123} H14 29 1 1 {} {0.199717316976 0.432494494106 0.761607298856} H15 30 1 1 {} {0.274231971658 0.320794667789 0.548814299288} H16 31 1 1 {} {0.195181515585 0.289073901299 0.544201684616} H17 32 1 1 {} {0.255967200107 0.378855722271 0.382361321211} H18 33 1 1 {} {0.201049033636 0.365526556826 0.376302168381} H19 34 1 1 {} {0.128976736414 0.504091391717 0.696307298871} H20 35 1 1 {} {0.106495712186 0.450531214257 0.622764404258} H21 36 1 6 {} {0.585315098559 0.342078997479 0.309194016077} C4 37 1 14 {} {0.580564365547 0.375579834884 0.426207015868} Si6 38 1 14 {} {0.569364519111 0.253017002207 0.291253475689} Si7 39 1 8 {} {0.609217719563 0.326537507044 0.494187905964} O5 40 1 8 {} {0.603156501033 0.450643756214 0.431136329643} O6 41 1 6 {} {0.521464074775 0.383958084605 0.462900034968} C5 42 1 6 {} {0.508468279166 0.242369948495 0.267631502841} C6 43 1 8 {} {0.584655984758 0.214347946563 0.385520169037} O7 44 1 8 {} {0.599088648156 0.215978803476 0.211364767279} O8 45 1 14 {} {0.646929796971 0.49551512038 0.45978273941} Si8 46 1 7 {} {0.631397889202 0.576538951897 0.4868740528} N4 47 1 14 {} {0.637819671851 0.604187744323 0.597181572414} Si9 48 1 14 {} {0.607529077017 0.630199173147 0.40773305673} Si10 49 1 7 {} {0.618508043876 0.611167492442 0.29809561093} N5 50 1 7 {} {0.690796777267 0.624003839558 0.633468791996} N6 51 1 1 {} {0.565900916152 0.373831575167 0.263209683979} H22 52 1 1 {} {0.620644757458 0.347206184206 0.289581219225} H23 53 1 1 {} {0.607620091633 0.279429877928 0.476693065055} H24 54 1 1 {} {0.502458015075 0.416767764286 0.41828594618} H25 55 1 1 {} {0.520087451685 0.405741868687 0.530160692938} H26 56 1 1 {} {0.50452600653 0.33526850239 0.465201425875} H27 57 1 1 {} {0.499141668598 0.189268838336 0.262985363089} H28 58 1 1 {} {0.499225040986 0.26653370025 0.204260028638} H29 59 1 1 {} {0.488046903283 0.265271534533 0.320373660452} H30 60 1 1 {} {0.587326545667 0.166009855637 0.383277485576} H31 61 1 1 {} {0.585882863106 0.211969776236 0.152659423375} H32 62 1 1 {} {0.668931993736 0.46671348142 0.540486975074} H33 63 1 1 {} {0.678637371214 0.49509698309 0.383176867997} H34 64 1 1 {} {0.610378694627 0.666350674916 0.603944264286} H35 65 1 1 {} {0.621529013414 0.551233023151 0.659083275417} H36 66 1 1 {} {0.55776072583 0.629370981655 0.415528144188} H37 67 1 1 {} {0.624464536073 0.699052945464 0.426006049066} H38 68 1 1 {} {0.602230166181 0.572398466488 0.268180914279} H39 69 1 1 {} {0.650282472515 0.614508543319 0.273909879015} H40 70 1 1 {} {0.712000958612 0.58688210064 0.651373795603} H41 71 1 1 {} {0.707575593228 0.662999380435 0.606399451762} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end