iterations/neb0_image06_iter10.sci output for 43: 3.6A-->1.6A 715(amd-3) Si-CH2H...H2HC-Si two dimer closed (TSS)
Status: finished#MD System 2.0 @Title neb0_image06 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.358521889034 0.53569068059 0.423026128887} C1 1 1 14 {} {0.339446498797 0.502683938625 0.534027465001} Si1 2 1 14 {} {0.413458711507 0.578492310218 0.418603390369} Si2 3 1 8 {} {0.342761451886 0.562897869145 0.609275848587} O1 4 1 8 {} {0.286523721132 0.480590438609 0.526098122728} O2 5 1 6 {} {0.371118105484 0.426712386989 0.569426525252} C2 6 1 6 {} {0.46218754035 0.521691072676 0.412186268545} C3 7 1 8 {} {0.415365636919 0.622207427835 0.513994984722} O3 8 1 8 {} {0.413958763382 0.628993129957 0.330743596906} O4 9 1 14 {} {0.234247048825 0.486258683809 0.556666388632} Si3 10 1 7 {} {0.214594026352 0.407575046929 0.588142503255} N1 11 1 14 {} {0.178567223584 0.403258231552 0.680015432125} Si4 12 1 14 {} {0.230179868086 0.33756914459 0.524169263833} Si5 13 1 7 {} {0.231406320918 0.349865614527 0.410534881131} N2 14 1 7 {} {0.13103394644 0.451550837703 0.672832376285} N3 15 1 1 {} {0.358074422596 0.495263882385 0.372952047689} H1 16 1 1 {} {0.333589070694 0.572803992778 0.400976944396} H2 17 1 1 {} {0.36651985163 0.595097444586 0.596219777049} H3 18 1 1 {} {0.367791188838 0.385703402691 0.520937096218} H4 19 1 1 {} {0.358452634502 0.408638398921 0.633928960933} H5 20 1 1 {} {0.406839154915 0.437682830358 0.577714253278} H6 21 1 1 {} {0.494474544354 0.547930469867 0.411890432936} H7 22 1 1 {} {0.461079385669 0.490278423213 0.351882401241} H8 23 1 1 {} {0.463064494737 0.487716510672 0.469555724} H9 24 1 1 {} {0.440602487676 0.651552629654 0.524123198372} H10 25 1 1 {} {0.442420760271 0.637563896964 0.302318893736} H11 26 1 1 {} {0.228464639194 0.531945743454 0.634667566662} H12 27 1 1 {} {0.208730968508 0.512861429107 0.478972075731} H13 28 1 1 {} {0.16568376837 0.331547843929 0.688134026001} H14 29 1 1 {} {0.201605255069 0.42760178029 0.76188240964} H15 30 1 1 {} {0.27610351447 0.31589314022 0.549073999723} H16 31 1 1 {} {0.197056459214 0.284171694636 0.544479725034} H17 32 1 1 {} {0.257828505229 0.373938506788 0.382644151959} H18 33 1 1 {} {0.202932455699 0.360618742132 0.376586629857} H19 34 1 1 {} {0.130858216761 0.49915449152 0.696564168088} H20 35 1 1 {} {0.108377217906 0.445619432811 0.623037883516} H21 36 1 6 {} {0.583439307951 0.347000733385 0.30891244565} C4 37 1 14 {} {0.578821050325 0.380243681421 0.426070532273} Si6 38 1 14 {} {0.567493310253 0.257933374277 0.290928873525} Si7 39 1 8 {} {0.607493259842 0.331391045101 0.493968362178} O5 40 1 8 {} {0.601237425062 0.455530300195 0.430824871426} O6 41 1 6 {} {0.520105825154 0.387877419182 0.462978510695} C5 42 1 6 {} {0.506595396505 0.247285872835 0.267333139192} C6 43 1 8 {} {0.582688285515 0.21923821881 0.38522199099} O7 44 1 8 {} {0.59720493129 0.220975831858 0.211058189781} O8 45 1 14 {} {0.645051689064 0.500356869758 0.459587707945} Si8 46 1 7 {} {0.629471380143 0.581417787141 0.486560806633} N4 47 1 14 {} {0.636051620618 0.609167381635 0.596955461681} Si9 48 1 14 {} {0.60562260665 0.635174516362 0.407721437468} Si10 49 1 7 {} {0.616658480608 0.615964016843 0.297905438146} N5 50 1 7 {} {0.688876035124 0.62895459202 0.633282569081} N6 51 1 1 {} {0.564022342798 0.378756759619 0.262906160087} H22 52 1 1 {} {0.618771323861 0.352130610742 0.289300706703} H23 53 1 1 {} {0.605759352907 0.284319821848 0.476422374899} H24 54 1 1 {} {0.501379459995 0.420176533569 0.418009589621} H25 55 1 1 {} {0.518281420179 0.410480539911 0.529624572513} H26 56 1 1 {} {0.502728811944 0.339724644345 0.465067265155} H27 57 1 1 {} {0.49726929773 0.194177750451 0.262719161647} H28 58 1 1 {} {0.497333910771 0.271433494825 0.203973121402} H29 59 1 1 {} {0.486186007766 0.270159647238 0.320118338953} H30 60 1 1 {} {0.585470520576 0.170910311945 0.38299569292} H31 61 1 1 {} {0.583999353381 0.216886471289 0.152364751587} H32 62 1 1 {} {0.667064311677 0.471628663401 0.540259064987} H33 63 1 1 {} {0.676745347458 0.500024019775 0.38291795468} H34 64 1 1 {} {0.608486788264 0.671229911474 0.603610210529} H35 65 1 1 {} {0.619643850423 0.556160759869 0.658680766039} H36 66 1 1 {} {0.555837577537 0.634306194205 0.415197634746} H37 67 1 1 {} {0.622587796495 0.704017487481 0.425648870232} H38 68 1 1 {} {0.600338869349 0.577312158992 0.267835798335} H39 69 1 1 {} {0.648377110283 0.619419982734 0.273618401257} H40 70 1 1 {} {0.71011068476 0.591808599293 0.651085276797} H41 71 1 1 {} {0.705707484065 0.667928810121 0.606134717381} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end