iterations/neb0_image06_iter11.sci output for 43: 3.6A-->1.6A 715(amd-3) Si-CH2H...H2HC-Si two dimer closed (TSS)
Status: finished#MD System 2.0 @Title neb0_image06 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.35852341989 0.535671875691 0.423029974256} C1 1 1 14 {} {0.339443135134 0.502643598128 0.534027021439} Si1 2 1 14 {} {0.413391628823 0.578606578863 0.418569110724} Si2 3 1 8 {} {0.342779901955 0.562870427622 0.609281520475} O1 4 1 8 {} {0.286558095909 0.480549035132 0.5260919544} O2 5 1 6 {} {0.371128321696 0.426684628021 0.569427381709} C2 6 1 6 {} {0.46213991486 0.521866637881 0.412111094771} C3 7 1 8 {} {0.41536376399 0.622200662828 0.514041783369} O3 8 1 8 {} {0.4139285053 0.629065323602 0.330666140777} O4 9 1 14 {} {0.234240288804 0.486227678434 0.556673741111} Si3 10 1 7 {} {0.214604765846 0.407546029983 0.588146781194} N1 11 1 14 {} {0.178579606884 0.403233065291 0.680018586827} Si4 12 1 14 {} {0.230188029869 0.337542296733 0.524164230249} Si5 13 1 7 {} {0.231418194153 0.349824127198 0.410531135931} N2 14 1 7 {} {0.131045338767 0.451520656094 0.672845764176} N3 15 1 1 {} {0.358087806763 0.49524484018 0.372960005851} H1 16 1 1 {} {0.333589769341 0.572767296546 0.400978138623} H2 17 1 1 {} {0.366528617229 0.595068082617 0.596219545869} H3 18 1 1 {} {0.367799827805 0.385674523552 0.520942521929} H4 19 1 1 {} {0.358463966676 0.408607771657 0.633932267946} H5 20 1 1 {} {0.406848199403 0.43765422303 0.577714671006} H6 21 1 1 {} {0.494449665601 0.547954940422 0.411912471271} H7 22 1 1 {} {0.461013415284 0.490395662395 0.351937689796} H8 23 1 1 {} {0.4629206701 0.487998975683 0.469524902003} H9 24 1 1 {} {0.440613520924 0.651537797234 0.524119871192} H10 25 1 1 {} {0.442430009537 0.637551765859 0.302337940238} H11 26 1 1 {} {0.228478602095 0.531916773008 0.63465829179} H12 27 1 1 {} {0.20874519367 0.512836096512 0.478968578903} H13 28 1 1 {} {0.165699518027 0.331524185431 0.688142134999} H14 29 1 1 {} {0.20162048462 0.427582940495 0.76188795272} H15 30 1 1 {} {0.276112421302 0.31586717248 0.549069736611} H16 31 1 1 {} {0.19706555433 0.284145894579 0.544483794601} H17 32 1 1 {} {0.257835693442 0.37391046646 0.382646926809} H18 33 1 1 {} {0.202940106643 0.360595254259 0.376588357448} H19 34 1 1 {} {0.130870808915 0.499128510672 0.696562602681} H20 35 1 1 {} {0.108388292588 0.445590111655 0.623038871431} H21 36 1 6 {} {0.583432732189 0.347033975165 0.308907594233} C4 37 1 14 {} {0.578886893008 0.380193337497 0.426085118242} Si6 38 1 14 {} {0.56748307291 0.257963038224 0.290923131483} Si7 39 1 8 {} {0.607545166598 0.331397782594 0.493991232155} O5 40 1 8 {} {0.601225910048 0.455562316138 0.430821429306} O6 41 1 6 {} {0.520202413261 0.387661108519 0.463085721465} C5 42 1 6 {} {0.506587112217 0.247315037085 0.267329080669} C6 43 1 8 {} {0.582661953427 0.21926712513 0.385212368822} O7 44 1 8 {} {0.597198918932 0.221019769395 0.211058349876} O8 45 1 14 {} {0.645026337125 0.500355064945 0.459588978706} Si8 46 1 7 {} {0.629452893291 0.58142745671 0.48655830028} N4 47 1 14 {} {0.636086116209 0.609212389774 0.59698132226} Si9 48 1 14 {} {0.605595290309 0.635204808801 0.407803827413} Si10 49 1 7 {} {0.616686829097 0.61590687142 0.297858246181} N5 50 1 7 {} {0.688796461501 0.62898264289 0.63332736742} N6 51 1 1 {} {0.56401396738 0.378784814778 0.262904168993} H22 52 1 1 {} {0.618760181474 0.352159085353 0.289296518411} H23 53 1 1 {} {0.605756997492 0.284325112834 0.476422051751} H24 54 1 1 {} {0.501547619628 0.419871013033 0.417927980274} H25 55 1 1 {} {0.518295956835 0.410454709512 0.529602854557} H26 56 1 1 {} {0.502743131332 0.339561661185 0.465128175898} H27 57 1 1 {} {0.497263789619 0.194201728001 0.26272277162} H28 58 1 1 {} {0.497318162172 0.271454830498 0.203970271528} H29 59 1 1 {} {0.48618009493 0.270176540232 0.320125065368} H30 60 1 1 {} {0.585469173974 0.1709348025 0.382988266703} H31 61 1 1 {} {0.58398654463 0.216913471558 0.152346273086} H32 62 1 1 {} {0.667056518409 0.471658312831 0.540265137985} H33 63 1 1 {} {0.676731071139 0.500054014775 0.382913996536} H34 64 1 1 {} {0.608474124969 0.671238444362 0.60358030635} H35 65 1 1 {} {0.61963306649 0.556194565079 0.658620411365} H36 66 1 1 {} {0.555814813925 0.634345671898 0.415177406587} H37 67 1 1 {} {0.622577509164 0.704057823778 0.425613788352} H38 68 1 1 {} {0.600335122677 0.577381492633 0.267843191792} H39 69 1 1 {} {0.648321834565 0.619443715922 0.273642014869} H40 70 1 1 {} {0.710125401418 0.591797335075 0.651100942131} H41 71 1 1 {} {0.705723738181 0.668008534408 0.606109150798} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end