iterations/neb0_image06_iter12.sci output for 43: 3.6A-->1.6A 715(amd-3) Si-CH2H...H2HC-Si two dimer closed (TSS)
Status: finished#MD System 2.0 @Title neb0_image06 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.358519505227 0.53566579086 0.423028044244} C1 1 1 14 {} {0.33944356473 0.502619655588 0.534026246502} Si1 2 1 14 {} {0.413350881316 0.578664755668 0.418552754394} Si2 3 1 8 {} {0.342788444328 0.562861125344 0.609287707418} O1 4 1 8 {} {0.286581502514 0.480530374894 0.526086457855} O2 5 1 6 {} {0.371132815048 0.426671404746 0.569426794474} C2 6 1 6 {} {0.462152545805 0.521901436028 0.412059668863} C3 7 1 8 {} {0.415357168343 0.622210058606 0.514075443531} O3 8 1 8 {} {0.413907072193 0.629119102167 0.3306145573} O4 9 1 14 {} {0.2342326012 0.486217303696 0.556679800382} Si3 10 1 7 {} {0.214609075748 0.407531477738 0.588149036157} N1 11 1 14 {} {0.178584872693 0.403218197942 0.680019141859} Si4 12 1 14 {} {0.230192644931 0.33752818194 0.524162057018} Si5 13 1 7 {} {0.231424362717 0.349805000146 0.410529651581} N2 14 1 7 {} {0.131051523409 0.451506485959 0.672852902496} N3 15 1 1 {} {0.358095818405 0.495238321351 0.372965151637} H1 16 1 1 {} {0.333585437412 0.572749947755 0.400977693393} H2 17 1 1 {} {0.366531945197 0.595052142946 0.596219477016} H3 18 1 1 {} {0.367804057923 0.385660908475 0.520945390917} H4 19 1 1 {} {0.358469351372 0.4085931576 0.633934071312} H5 20 1 1 {} {0.406851603059 0.437640761822 0.577714175814} H6 21 1 1 {} {0.494434110164 0.547984397026 0.411918000799} H7 22 1 1 {} {0.460976463422 0.490460707631 0.351962707036} H8 23 1 1 {} {0.46284764813 0.488121683777 0.46953418864} H9 24 1 1 {} {0.440620043464 0.651533077663 0.524119718444} H10 25 1 1 {} {0.442433748782 0.637546645502 0.302347406359} H11 26 1 1 {} {0.228485341141 0.531902185733 0.6346530128} H12 27 1 1 {} {0.208752025769 0.512823294054 0.478967351545} H13 28 1 1 {} {0.165707294249 0.331513623847 0.688146488969} H14 29 1 1 {} {0.201628202533 0.427574587619 0.76189127153} H15 30 1 1 {} {0.276116804216 0.315854734582 0.549067749336} H16 31 1 1 {} {0.197069366625 0.284132901184 0.544485855219} H17 32 1 1 {} {0.257839001781 0.373896649441 0.382648411295} H18 33 1 1 {} {0.202942980984 0.360584151714 0.376588201255} H19 34 1 1 {} {0.130876700299 0.499116070132 0.696561503948} H20 35 1 1 {} {0.108393554597 0.445575966284 0.623039154558} H21 36 1 6 {} {0.583431187972 0.347048601671 0.308902740808} C4 37 1 14 {} {0.578942209457 0.380169834367 0.426077196284} Si6 38 1 14 {} {0.567477534059 0.257976252819 0.290923927145} Si7 39 1 8 {} {0.60758137563 0.331395705467 0.494009287195} O5 40 1 8 {} {0.601222510465 0.455574900816 0.430825827388} O6 41 1 6 {} {0.520235551835 0.387568700786 0.463167442419} C5 42 1 6 {} {0.506582977093 0.247328714943 0.267327748535} C6 43 1 8 {} {0.582649539407 0.219282320427 0.38520829893} O7 44 1 8 {} {0.597197671598 0.221040200473 0.211058384621} O8 45 1 14 {} {0.645006548755 0.500352593771 0.459581308173} Si8 46 1 7 {} {0.629451450269 0.581431565369 0.4865894891} N4 47 1 14 {} {0.636083090572 0.609223994907 0.596982669922} Si9 48 1 14 {} {0.605579577013 0.635215876278 0.407792951913} Si10 49 1 7 {} {0.616708538618 0.615868064523 0.297820021941} N5 50 1 7 {} {0.688745048711 0.628996413541 0.633356251025} N6 51 1 1 {} {0.564010836456 0.37879801975 0.262907690338} H22 52 1 1 {} {0.618754263901 0.352172736089 0.289293514738} H23 53 1 1 {} {0.605757861669 0.284319205644 0.476423166741} H24 54 1 1 {} {0.501606215551 0.419766222755 0.417835468516} H25 55 1 1 {} {0.518306746741 0.410436271494 0.529609653433} H26 56 1 1 {} {0.50275156394 0.339449800805 0.465170748801} H27 57 1 1 {} {0.49726158038 0.19421279511 0.262724327554} H28 58 1 1 {} {0.497309942332 0.271465894584 0.20396764347} H29 59 1 1 {} {0.48617719174 0.270185087276 0.320128123107} H30 60 1 1 {} {0.585468527581 0.170946499587 0.382983617762} H31 61 1 1 {} {0.583979755796 0.216926247391 0.152334298677} H32 62 1 1 {} {0.667052758276 0.471672031673 0.540268855195} H33 63 1 1 {} {0.676724877802 0.500066960924 0.382911974899} H34 64 1 1 {} {0.608471139994 0.671241253046 0.603564906777} H35 65 1 1 {} {0.619630482159 0.556213365082 0.658589762169} H36 66 1 1 {} {0.555804769322 0.634365796983 0.415172021223} H37 67 1 1 {} {0.622572822754 0.704078127953 0.425601765113} H38 68 1 1 {} {0.600339290578 0.577432561003 0.267864647167} H39 69 1 1 {} {0.648278498366 0.619454192982 0.273670952881} H40 70 1 1 {} {0.71014496246 0.591773513907 0.651118800915} H41 71 1 1 {} {0.705742998358 0.66806971658 0.606083577068} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end