iterations/neb0_image06_iter14.sci output for 43: 3.6A-->1.6A 715(amd-3) Si-CH2H...H2HC-Si two dimer closed (TSS)
Status: finished#MD System 2.0 @Title neb0_image06 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.358501848164 0.53568539087 0.423011285265} C1 1 1 14 {} {0.339443490841 0.502615339927 0.534027660925} Si1 2 1 14 {} {0.413353030987 0.57862804581 0.418560048546} Si2 3 1 8 {} {0.342780579585 0.562883692736 0.609297038446} O1 4 1 8 {} {0.286606836368 0.480553131246 0.526076685972} O2 5 1 6 {} {0.371129600111 0.426680703502 0.569423095604} C2 6 1 6 {} {0.462290727392 0.52167344246 0.412067476168} C3 7 1 8 {} {0.415333565352 0.622260674055 0.514098407974} O3 8 1 8 {} {0.413887971666 0.629168699773 0.330590702734} O4 9 1 14 {} {0.234213040846 0.486236583269 0.556691788812} Si3 10 1 7 {} {0.214602837795 0.407541729704 0.588147164685} N1 11 1 14 {} {0.178577896723 0.403220465205 0.680009280154} Si4 12 1 14 {} {0.23019026651 0.337538438715 0.524162660747} Si5 13 1 7 {} {0.23142167998 0.349820969137 0.410534140349} N2 14 1 7 {} {0.131050954253 0.451516588429 0.672852184572} N3 15 1 1 {} {0.358097444087 0.495255142305 0.37296657585} H1 16 1 1 {} {0.333564615663 0.572764708838 0.400972721563} H2 17 1 1 {} {0.366525974028 0.595056694907 0.59622025794} H3 18 1 1 {} {0.367801156149 0.385672039097 0.520944260326} H4 19 1 1 {} {0.358464840684 0.408604832042 0.633933214226} H5 20 1 1 {} {0.406844218655 0.43765152289 0.577711162709} H6 21 1 1 {} {0.494436045396 0.548049579725 0.411887967191} H7 22 1 1 {} {0.46098014004 0.4904337851 0.351901367361} H8 23 1 1 {} {0.462884929959 0.4879665182 0.469639347418} H9 24 1 1 {} {0.440622203024 0.651549797872 0.524127734277} H10 25 1 1 {} {0.442428791216 0.637554315665 0.302340273147} H11 26 1 1 {} {0.228480570665 0.531911422852 0.634654239215} H12 27 1 1 {} {0.208746665273 0.512830919363 0.478968693972} H13 28 1 1 {} {0.16570222151 0.331522876881 0.688146185056} H14 29 1 1 {} {0.201624220452 0.427583834006 0.761892973797} H15 30 1 1 {} {0.276115386052 0.315862833916 0.549069653754} H16 31 1 1 {} {0.19706382014 0.284138535134 0.544485231922} H17 32 1 1 {} {0.25783615075 0.373905819673 0.3826476548} H18 33 1 1 {} {0.202937528181 0.360593105381 0.376584423602} H19 34 1 1 {} {0.130871674108 0.49912571958 0.696560681407} H20 35 1 1 {} {0.108389581991 0.445586142918 0.623038156458} H21 36 1 6 {} {0.583441672171 0.347034811339 0.308892384226} C4 37 1 14 {} {0.578994595751 0.380166984286 0.426032026792} Si6 38 1 14 {} {0.56747856193 0.257955985967 0.290937473434} Si7 39 1 8 {} {0.607610097646 0.331373167369 0.494023337683} O5 40 1 8 {} {0.601243605394 0.45557564294 0.430848962261} O6 41 1 6 {} {0.520137716356 0.387697006828 0.463159039373} C5 42 1 6 {} {0.506585542619 0.247319985872 0.267329913644} C6 43 1 8 {} {0.582659985327 0.219277885983 0.385213734942} O7 44 1 8 {} {0.597205799939 0.221023943033 0.211062269403} O8 45 1 14 {} {0.644990835269 0.50033697425 0.459573351228} Si8 46 1 7 {} {0.629470330191 0.581431436337 0.486622530639} N4 47 1 14 {} {0.636035392991 0.609192621681 0.596991716523} Si9 48 1 14 {} {0.60557670567 0.6351980821 0.407668105442} Si10 49 1 7 {} {0.616736881869 0.615829905295 0.297730149193} N5 50 1 7 {} {0.688696348399 0.628978276672 0.633358203223} N6 51 1 1 {} {0.564017315105 0.378786835856 0.262926745776} H22 52 1 1 {} {0.618756532211 0.352161718058 0.289288735869} H23 53 1 1 {} {0.60576693305 0.284284572206 0.476429187527} H24 54 1 1 {} {0.501472772174 0.420015707587 0.417691777276} H25 55 1 1 {} {0.51831503875 0.410432397432 0.52972445009} H26 56 1 1 {} {0.502757165298 0.339383352996 0.465205901212} H27 57 1 1 {} {0.497265193403 0.194201371094 0.262722269586} H28 58 1 1 {} {0.49731305951 0.271460810397 0.203965440224} H29 59 1 1 {} {0.486178831395 0.270180841307 0.320125175812} H30 60 1 1 {} {0.58546891897 0.170937830812 0.382981675165} H31 61 1 1 {} {0.583981353042 0.216915842877 0.152327238972} H32 62 1 1 {} {0.667052998663 0.471660797426 0.54025920692} H33 63 1 1 {} {0.676731616134 0.500052170705 0.382909103739} H34 64 1 1 {} {0.608483958283 0.671236299406 0.603569047292} H35 65 1 1 {} {0.619641136833 0.556206049659 0.658608256986} H36 66 1 1 {} {0.555820198257 0.634354685814 0.415192357829} H37 67 1 1 {} {0.622576404038 0.704060076727 0.425626444132} H38 68 1 1 {} {0.600360838695 0.577476129085 0.267928351465} H39 69 1 1 {} {0.648236195506 0.619445090443 0.273728673655} H40 70 1 1 {} {0.710187107465 0.591710222691 0.651149157916} H41 71 1 1 {} {0.705781833608 0.668126754275 0.606041514742} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end