iterations/neb0_image06_iter17.sci output for 43: 3.6A-->1.6A 715(amd-3) Si-CH2H...H2HC-Si two dimer closed (TSS)
Status: finished#MD System 2.0 @Title neb0_image06 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.358480077027 0.535696802608 0.423002277431} C1 1 1 14 {} {0.339463537586 0.502609273496 0.53405512814} Si1 2 1 14 {} {0.413367096759 0.578645133426 0.418513931276} Si2 3 1 8 {} {0.34277437938 0.562857227844 0.60930110301} O1 4 1 8 {} {0.286589663235 0.480539238243 0.526081290507} O2 5 1 6 {} {0.371136156965 0.426665197061 0.569423886657} C2 6 1 6 {} {0.462320956899 0.52165826093 0.412115451123} C3 7 1 8 {} {0.415299348904 0.622327202119 0.514138664239} O3 8 1 8 {} {0.413833120731 0.629291219878 0.330528299887} O4 9 1 14 {} {0.234235703307 0.486215235433 0.556684726307} Si3 10 1 7 {} {0.214605081349 0.407533024113 0.588142486588} N1 11 1 14 {} {0.178582006158 0.403208942173 0.68001136778} Si4 12 1 14 {} {0.230193384354 0.337528353541 0.524162104231} Si5 13 1 7 {} {0.231418781704 0.349807062159 0.410528609055} N2 14 1 7 {} {0.13105405502 0.451501455593 0.672849618442} N3 15 1 1 {} {0.35811251388 0.495259153528 0.372966698459} H1 16 1 1 {} {0.333523995884 0.572755620969 0.400961908101} H2 17 1 1 {} {0.366536939386 0.595051136093 0.596217454748} H3 18 1 1 {} {0.367805242494 0.385658232913 0.520945112501} H4 19 1 1 {} {0.358469061881 0.408594802491 0.633931573068} H5 20 1 1 {} {0.406845148281 0.437639931914 0.577707637745} H6 21 1 1 {} {0.494458224438 0.548182618814 0.411858659956} H7 22 1 1 {} {0.460935314271 0.490433670964 0.351756186974} H8 23 1 1 {} {0.462821277177 0.487969519276 0.469778924013} H9 24 1 1 {} {0.440629220612 0.65155454502 0.524136156966} H10 25 1 1 {} {0.442423674507 0.637554997504 0.302350468134} H11 26 1 1 {} {0.228485857628 0.531904464245 0.634656864885} H12 27 1 1 {} {0.20875081062 0.512820884775 0.47896054662} H13 28 1 1 {} {0.165708662308 0.331508687467 0.688153667242} H14 29 1 1 {} {0.201630916445 0.427577005422 0.761894292318} H15 30 1 1 {} {0.27612177243 0.315849826158 0.549068963073} H16 31 1 1 {} {0.197064850171 0.284123481647 0.544487892058} H17 32 1 1 {} {0.257841163033 0.373894501916 0.382647528777} H18 33 1 1 {} {0.20294417755 0.360580658826 0.376589454458} H19 34 1 1 {} {0.130876767358 0.499115876142 0.696559847393} H20 35 1 1 {} {0.108399009922 0.445574167399 0.623048929835} H21 36 1 6 {} {0.583456659422 0.347032757996 0.308872983565} C4 37 1 14 {} {0.579041184809 0.380128962864 0.426043746949} Si6 38 1 14 {} {0.567470630052 0.257956344964 0.290933504855} Si7 39 1 8 {} {0.607716971308 0.331311131963 0.494045184865} O5 40 1 8 {} {0.601243108744 0.455577054313 0.430856665093} O6 41 1 6 {} {0.520072573939 0.387675833069 0.463061256756} C5 42 1 6 {} {0.506580379403 0.247331448522 0.267324700257} C6 43 1 8 {} {0.582653993207 0.219280209909 0.385224041523} O7 44 1 8 {} {0.597201039776 0.221039129274 0.211026335816} O8 45 1 14 {} {0.644992838823 0.500353627078 0.459601400456} Si8 46 1 7 {} {0.629455526442 0.581455295382 0.486555402384} N4 47 1 14 {} {0.635976259933 0.609191994034 0.597012247844} Si9 48 1 14 {} {0.605580008097 0.63518368116 0.407586162729} Si10 49 1 7 {} {0.616684518094 0.615871879948 0.297899551727} N5 50 1 7 {} {0.688812936481 0.629036593604 0.633382352131} N6 51 1 1 {} {0.564016469033 0.37880355727 0.262954604717} H22 52 1 1 {} {0.618759719562 0.352169677377 0.289258673435} H23 53 1 1 {} {0.605782798224 0.284259466471 0.476453381615} H24 54 1 1 {} {0.501471077519 0.420016371468 0.417531783924} H25 55 1 1 {} {0.518334065439 0.410405016464 0.529881393485} H26 56 1 1 {} {0.502807007526 0.339213375753 0.465320422807} H27 57 1 1 {} {0.497266041775 0.194210408555 0.262722644071} H28 58 1 1 {} {0.497303464327 0.271472313747 0.203963771817} H29 59 1 1 {} {0.486175158915 0.270191608617 0.320128000912} H30 60 1 1 {} {0.585467328244 0.170962389391 0.382973108978} H31 61 1 1 {} {0.583981380081 0.216929347926 0.152345129042} H32 62 1 1 {} {0.667041828459 0.471671864945 0.540238493905} H33 63 1 1 {} {0.676722100344 0.500058243462 0.382909263636} H34 64 1 1 {} {0.6084828751 0.671247414501 0.603548187645} H35 65 1 1 {} {0.619637956821 0.556208295795 0.658602677313} H36 66 1 1 {} {0.55581877427 0.634372431918 0.415194593472} H37 67 1 1 {} {0.622567461217 0.704056288399 0.42561841993} H38 68 1 1 {} {0.600329335858 0.577448581062 0.267888197209} H39 69 1 1 {} {0.648293500981 0.61946463233 0.273688868607} H40 70 1 1 {} {0.71014865877 0.59178046524 0.651121092442} H41 71 1 1 {} {0.70574839498 0.668071201283 0.606100348002} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end