iterations/neb0_image06_iter18.sci output for 43: 3.6A-->1.6A 715(amd-3) Si-CH2H...H2HC-Si two dimer closed (TSS)
Status: finished#MD System 2.0 @Title neb0_image06 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.358465896951 0.535676729564 0.423004509837} C1 1 1 14 {} {0.339482953154 0.502551515644 0.534080406109} Si1 2 1 14 {} {0.413288460676 0.5788334138 0.418418947725} Si2 3 1 8 {} {0.342795924249 0.562786997555 0.609310432913} O1 4 1 8 {} {0.286604617434 0.480460355572 0.526082350598} O2 5 1 6 {} {0.371156864813 0.426609037599 0.569427045878} C2 6 1 6 {} {0.462244514581 0.521948198691 0.412046296536} C3 7 1 8 {} {0.415270291354 0.622369825554 0.514232689931} O3 8 1 8 {} {0.413744401914 0.629496025745 0.330369847106} O4 9 1 14 {} {0.234259136999 0.486148831589 0.556680790222} Si3 10 1 7 {} {0.214623562365 0.407480624444 0.588144322179} N1 11 1 14 {} {0.178605282007 0.403161361731 0.680023329485} Si4 12 1 14 {} {0.230209098096 0.337476358925 0.524155575615} Si5 13 1 7 {} {0.231433139595 0.34973253761 0.41051580793} N2 14 1 7 {} {0.131072570641 0.451443011946 0.672865076941} N3 15 1 1 {} {0.358145359124 0.495232165202 0.372976965703} H1 16 1 1 {} {0.333490234121 0.572691788173 0.400954027726} H2 17 1 1 {} {0.366561333511 0.595003345755 0.596214149267} H3 18 1 1 {} {0.367822107977 0.385601408032 0.520953582954} H4 19 1 1 {} {0.358490252028 0.408539312391 0.633934770788} H5 20 1 1 {} {0.406861251727 0.437586116186 0.577705710872} H6 21 1 1 {} {0.494444820716 0.54832854621 0.411868798361} H7 22 1 1 {} {0.460799866815 0.490606536229 0.351715251212} H8 23 1 1 {} {0.462550808238 0.488403479317 0.469845929052} H9 24 1 1 {} {0.440649600238 0.651532893056 0.524137488918} H10 25 1 1 {} {0.442430907901 0.637536848043 0.302389888509} H11 26 1 1 {} {0.228511616696 0.531854737027 0.634646405214} H12 27 1 1 {} {0.208776128152 0.512773460598 0.478947731017} H13 28 1 1 {} {0.165738235196 0.331459835806 0.688172126805} H14 29 1 1 {} {0.201659579978 0.427541496668 0.761901750967} H15 30 1 1 {} {0.276140250864 0.315799306866 0.549061810053} H16 31 1 1 {} {0.197080105439 0.284071938145 0.544496121053} H17 32 1 1 {} {0.25785667618 0.373841699167 0.382651669672} H18 33 1 1 {} {0.202962765796 0.360533365773 0.376597689764} H19 34 1 1 {} {0.130900632489 0.499067158903 0.696557054368} H20 35 1 1 {} {0.108424735181 0.445518949068 0.623061381296} H21 36 1 6 {} {0.58345924608 0.347077700935 0.308851317864} C4 37 1 14 {} {0.579161723949 0.380032340137 0.42608835968} Si6 38 1 14 {} {0.567448891153 0.258005408887 0.290917038342} Si7 39 1 8 {} {0.607886472307 0.33126507568 0.494093444816} O5 40 1 8 {} {0.601216201263 0.45561061071 0.430852724434} O6 41 1 6 {} {0.520173152911 0.387317762307 0.463142364388} C5 42 1 6 {} {0.50656269693 0.247384221496 0.267313931386} C6 43 1 8 {} {0.582608898977 0.21932334385 0.385220022863} O7 44 1 8 {} {0.597185617813 0.221118694116 0.210988635962} O8 45 1 14 {} {0.644965775643 0.500379345546 0.459624839874} Si8 46 1 7 {} {0.629415200345 0.581491205984 0.486507968306} N4 47 1 14 {} {0.635965281138 0.609254266781 0.597040188691} Si9 48 1 14 {} {0.605548941401 0.635214497321 0.40762104428} Si10 49 1 7 {} {0.616658052052 0.615857248379 0.298053836646} N5 50 1 7 {} {0.688849379341 0.629141991675 0.633469823687} N6 51 1 1 {} {0.564002156486 0.378862567165 0.262974589112} H22 52 1 1 {} {0.618747965033 0.352219877076 0.289223042248} H23 53 1 1 {} {0.605793246795 0.28425053928 0.4764758363} H24 54 1 1 {} {0.501734633927 0.419530348277 0.417295773842} H25 55 1 1 {} {0.518370619752 0.410336852732 0.529952935976} H26 56 1 1 {} {0.502875761526 0.338843817127 0.465506702093} H27 57 1 1 {} {0.49725835922 0.194256286092 0.262728548074} H28 58 1 1 {} {0.497271372338 0.271514765134 0.203958439396} H29 59 1 1 {} {0.486162983778 0.270226812597 0.320140783677} H30 60 1 1 {} {0.585463825978 0.171022556819 0.382955124515} H31 61 1 1 {} {0.583963520373 0.216982892627 0.152340286459} H32 62 1 1 {} {0.667020696513 0.471726101124 0.540232890805} H33 63 1 1 {} {0.676690992886 0.500108986388 0.382907109172} H34 64 1 1 {} {0.608461412121 0.671271873356 0.603486675833} H35 65 1 1 {} {0.619617482202 0.556259172885 0.658510528005} H36 66 1 1 {} {0.555780139518 0.634447863452 0.415164466896} H37 67 1 1 {} {0.622543417096 0.704114324315 0.425557207836} H38 68 1 1 {} {0.600285046672 0.577497612194 0.267835698931} H39 69 1 1 {} {0.648290577613 0.619518595982 0.273661863829} H40 70 1 1 {} {0.710115154491 0.591857993233 0.651104299535} H41 71 1 1 {} {0.705723097941 0.668103538263 0.606140227679} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end