iterations/neb0_image06_iter3.sci output for 43: 3.6A-->1.6A 715(amd-3) Si-CH2H...H2HC-Si two dimer closed (TSS)
Status: finished#MD System 2.0 @Title neb0_image06 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.358494754817 0.535792700474 0.422975276537} C1 1 1 14 {} {0.339395046299 0.502784164215 0.534027776456} Si1 2 1 14 {} {0.413691628911 0.57802054909 0.418733648822} Si2 3 1 8 {} {0.342695844108 0.563043114394 0.609271161766} O1 4 1 8 {} {0.286556348799 0.4807905554 0.52607690447} O2 5 1 6 {} {0.371086133298 0.426820174537 0.569416353488} C2 6 1 6 {} {0.462569481124 0.520757528428 0.412563485616} C3 7 1 8 {} {0.415326959982 0.62230164087 0.513870175591} O3 8 1 8 {} {0.414023029053 0.628831141073 0.330968667736} O4 9 1 14 {} {0.234176457445 0.48636447119 0.556704682068} Si3 10 1 7 {} {0.214550885821 0.407699662715 0.588123998715} N1 11 1 14 {} {0.178512728649 0.403362829416 0.679955684162} Si4 12 1 14 {} {0.230137774645 0.33770461784 0.524174912951} Si5 13 1 7 {} {0.231368392933 0.350023122791 0.410569702211} N2 14 1 7 {} {0.131001833233 0.451663580363 0.672802893551} N3 15 1 1 {} {0.358030941779 0.495356315903 0.372928981935} H1 16 1 1 {} {0.333552214365 0.57295368403 0.40096617532} H2 17 1 1 {} {0.366473633459 0.595199732464 0.596227826042} H3 18 1 1 {} {0.367755903627 0.385822048571 0.520917385308} H4 19 1 1 {} {0.358405161922 0.408763215663 0.633916159739} H5 20 1 1 {} {0.406792614099 0.437796473367 0.577707556338} H6 21 1 1 {} {0.494565491991 0.547953072471 0.411762386108} H7 22 1 1 {} {0.461309764359 0.48979538064 0.351517586273} H8 23 1 1 {} {0.463615808394 0.486509286834 0.469808696434} H9 24 1 1 {} {0.440577436568 0.651642780795 0.524152811838} H10 25 1 1 {} {0.442389337447 0.63762011116 0.302233140942} H11 26 1 1 {} {0.22841015058 0.532063027927 0.634699658314} H12 27 1 1 {} {0.208673526102 0.512964472582 0.478983453223} H13 28 1 1 {} {0.165620849018 0.331637150631 0.68810899297} H14 29 1 1 {} {0.20154680942 0.427682267877 0.761875794462} H15 30 1 1 {} {0.276076667714 0.315989778042 0.549091649113} H16 31 1 1 {} {0.197015608547 0.284263682658 0.544466990651} H17 32 1 1 {} {0.257798009459 0.374050963635 0.382633711682} H18 33 1 1 {} {0.202893892651 0.360716165223 0.376571598003} H19 34 1 1 {} {0.130806838276 0.499260018874 0.696566802419} H20 35 1 1 {} {0.108329844332 0.445736018228 0.623024364613} H21 36 1 6 {} {0.583482356561 0.346889216967 0.308904442247} C4 37 1 14 {} {0.578658088455 0.380294886426 0.425992944443} Si6 38 1 14 {} {0.567529662052 0.25777147423 0.290970369952} Si7 39 1 8 {} {0.607358315097 0.33136647835 0.493897139025} O5 40 1 8 {} {0.601363279237 0.455546791648 0.430878650893} O6 41 1 6 {} {0.519583574135 0.38885539439 0.462332508222} C5 42 1 6 {} {0.506630715733 0.247187025304 0.267345424807} C6 43 1 8 {} {0.582793786339 0.219149648878 0.385254444957} O7 44 1 8 {} {0.597244304099 0.220810523833 0.211116342417} O8 45 1 14 {} {0.64510503385 0.500262690768 0.459660187281} Si8 46 1 7 {} {0.62950122106 0.581397167067 0.48624856671} N4 47 1 14 {} {0.63608371448 0.60908165929 0.597185952159} Si9 48 1 14 {} {0.605672391889 0.63508856138 0.407737292699} Si10 49 1 7 {} {0.616729455985 0.615925238104 0.297454921228} N5 50 1 7 {} {0.688757882553 0.628740123246 0.63309511665} N6 51 1 1 {} {0.564062866764 0.378637182223 0.262944548765} H22 52 1 1 {} {0.618809249183 0.35201324724 0.289309604658} H23 53 1 1 {} {0.605780055758 0.284233092062 0.476425254304} H24 54 1 1 {} {0.500627741454 0.421561797655 0.418150096647} H25 55 1 1 {} {0.518241588253 0.410606886377 0.530035346184} H26 56 1 1 {} {0.502689499627 0.340168539119 0.464925419647} H27 57 1 1 {} {0.497293145035 0.194070086604 0.262703201083} H28 58 1 1 {} {0.497393156185 0.271349485403 0.203984453609} H29 59 1 1 {} {0.486208391715 0.270094120047 0.320090409404} H30 60 1 1 {} {0.58547615197 0.170801827408 0.383016112676} H31 61 1 1 {} {0.584036472247 0.216774226517 0.152375789839} H32 62 1 1 {} {0.667083463018 0.47151541312 0.540183604461} H33 63 1 1 {} {0.676804678876 0.499905767109 0.382903726228} H34 64 1 1 {} {0.608536472866 0.671200222459 0.603705887998} H35 65 1 1 {} {0.619686545022 0.556018934424 0.658915471087} H36 66 1 1 {} {0.55596000225 0.634147648058 0.415283826846} H37 67 1 1 {} {0.622627222451 0.703827197946 0.425780726193} H38 68 1 1 {} {0.60041194593 0.577244899425 0.267987785342} H39 69 1 1 {} {0.648395644702 0.619329991128 0.273718297925} H40 70 1 1 {} {0.710199660242 0.591647367715 0.651118238152} H41 71 1 1 {} {0.705786429705 0.66787601519 0.606057159208} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end