iterations/neb0_image06_iter5.sci output for 43: 3.6A-->1.6A 715(amd-3) Si-CH2H...H2HC-Si two dimer closed (TSS)
Status: finished#MD System 2.0 @Title neb0_image06 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.35849288137 0.535790349161 0.422976739412} C1 1 1 14 {} {0.339406513417 0.502784962935 0.534026084544} Si1 2 1 14 {} {0.413681587576 0.578035605372 0.418732943339} Si2 3 1 8 {} {0.342695888277 0.563041047012 0.609272930077} O1 4 1 8 {} {0.286542745013 0.480783790489 0.526080098837} O2 5 1 6 {} {0.37108486682 0.426818906997 0.569416213094} C2 6 1 6 {} {0.462578011142 0.520748632301 0.412527378699} C3 7 1 8 {} {0.415327579231 0.622304092415 0.51387669626} O3 8 1 8 {} {0.414022107124 0.62883729658 0.330960042962} O4 9 1 14 {} {0.234184554421 0.486371441383 0.556698174865} Si3 10 1 7 {} {0.214550618434 0.407695491374 0.588124910359} N1 11 1 14 {} {0.178513566643 0.403356866651 0.679962319066} Si4 12 1 14 {} {0.230140722659 0.337696533124 0.524177063266} Si5 13 1 7 {} {0.231368534511 0.350022543324 0.410567142926} N2 14 1 7 {} {0.131001587807 0.451663213133 0.672801209374} N3 15 1 1 {} {0.358031993321 0.49535540349 0.372929863769} H1 16 1 1 {} {0.333552874254 0.572950884812 0.400966220956} H2 17 1 1 {} {0.366474575387 0.595197513958 0.596226857061} H3 18 1 1 {} {0.367756695145 0.385819955762 0.520917791801} H4 19 1 1 {} {0.358406202507 0.408760785857 0.633916708608} H5 20 1 1 {} {0.406793681236 0.437794945047 0.577707559114} H6 21 1 1 {} {0.494559838075 0.547954512413 0.411764828631} H7 22 1 1 {} {0.461304386943 0.489817162382 0.351545164878} H8 23 1 1 {} {0.463604797273 0.486528411354 0.469811256551} H9 24 1 1 {} {0.440576849591 0.651639846482 0.524151586592} H10 25 1 1 {} {0.442388643937 0.637618865601 0.302236126288} H11 26 1 1 {} {0.228410898758 0.532059766952 0.634698622936} H12 27 1 1 {} {0.208674553165 0.512961597974 0.478984425755} H13 28 1 1 {} {0.165622133683 0.331637439502 0.688108853734} H14 29 1 1 {} {0.201547991307 0.427681029541 0.761874511823} H15 30 1 1 {} {0.276075977139 0.315989267444 0.549091372998} H16 31 1 1 {} {0.197016289082 0.284263037055 0.544466759509} H17 32 1 1 {} {0.257798570254 0.37404853945 0.382633909396} H18 33 1 1 {} {0.202894414764 0.360714355639 0.376571429555} H19 34 1 1 {} {0.130807637524 0.499258059597 0.696566847032} H20 35 1 1 {} {0.108330741966 0.445734011267 0.623025142662} H21 36 1 6 {} {0.583480759992 0.34688704428 0.308905578235} C4 37 1 14 {} {0.57867534551 0.3803147715 0.425979799211} Si6 38 1 14 {} {0.567529165482 0.257779259964 0.290971527528} Si7 39 1 8 {} {0.607362095556 0.3313624094 0.493903636219} O5 40 1 8 {} {0.601353297227 0.455524715984 0.430879831377} O6 41 1 6 {} {0.519597548111 0.38883531405 0.462409947033} C5 42 1 6 {} {0.506629615647 0.24718609645 0.267346495378} C6 43 1 8 {} {0.582791993077 0.219149626801 0.385254848526} O7 44 1 8 {} {0.597243720604 0.220811301977 0.211109350313} O8 45 1 14 {} {0.64510073985 0.500275967813 0.459637417464} Si8 46 1 7 {} {0.629516627916 0.581394084676 0.486341128208} N4 47 1 14 {} {0.636037305256 0.609057618465 0.597122305622} Si9 48 1 14 {} {0.605677109032 0.635082597303 0.407629709579} Si10 49 1 7 {} {0.616715558759 0.615944932898 0.297520322065} N5 50 1 7 {} {0.688795541287 0.628755452924 0.633107478602} N6 51 1 1 {} {0.564062277836 0.378639724393 0.262944483714} H22 52 1 1 {} {0.618808578162 0.352015796398 0.289310055208} H23 53 1 1 {} {0.60578012294 0.284233590915 0.476425722869} H24 54 1 1 {} {0.500627239115 0.421561786002 0.418113284624} H25 55 1 1 {} {0.518244012082 0.410595162942 0.530002377123} H26 56 1 1 {} {0.50268851656 0.34015110338 0.464927939796} H27 57 1 1 {} {0.49729291149 0.194072875192 0.262703478453} H28 58 1 1 {} {0.497391942487 0.271351602778 0.203982834104} H29 59 1 1 {} {0.486208148435 0.270095355993 0.320090811532} H30 60 1 1 {} {0.585476071548 0.170804324727 0.383015809064} H31 61 1 1 {} {0.584036621996 0.216776360137 0.152378750376} H32 62 1 1 {} {0.667084960207 0.471515970969 0.540193369041} H33 63 1 1 {} {0.676804310595 0.499905913155 0.382907799347} H34 64 1 1 {} {0.608539590442 0.671198639031 0.603707119277} H35 65 1 1 {} {0.619689250645 0.556025945394 0.658910788109} H36 66 1 1 {} {0.555954456529 0.634151671729 0.415287133328} H37 67 1 1 {} {0.62262712487 0.703835687481 0.425786067147} H38 68 1 1 {} {0.600411679869 0.577242313567 0.267985812336} H39 69 1 1 {} {0.648397991368 0.619329440836 0.273715062428} H40 70 1 1 {} {0.71019607366 0.591651545359 0.651119543941} H41 71 1 1 {} {0.70578215467 0.667874158149 0.60606290587} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end