iterations/neb0_image07_iter12.sci output for 43: 3.6A-->1.6A 715(amd-3) Si-CH2H...H2HC-Si two dimer closed (TSS)
Status: finished#MD System 2.0 @Title neb0_image07 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.360413455627 0.530682024419 0.423293318327} C1 1 1 14 {} {0.341377592358 0.497657534082 0.534355501888} Si1 2 1 14 {} {0.414840585659 0.574516219639 0.418629837851} Si2 3 1 8 {} {0.344667997605 0.557938480634 0.609564622659} O1 4 1 8 {} {0.288453600667 0.475693063565 0.526386359618} O2 5 1 6 {} {0.373044975733 0.421667244382 0.569730106399} C2 6 1 6 {} {0.463408850747 0.518469926223 0.411854885746} C3 7 1 8 {} {0.417206318817 0.617321267764 0.514518556509} O3 8 1 8 {} {0.415651689356 0.624343364399 0.330462469586} O4 9 1 14 {} {0.236131660917 0.481228208357 0.556977383105} Si3 10 1 7 {} {0.216516367714 0.402500092831 0.58840039074} N1 11 1 14 {} {0.180494265328 0.398239845155 0.68024752199} Si4 12 1 14 {} {0.232107970945 0.332511965894 0.524373284228} Si5 13 1 7 {} {0.233326464177 0.344961029318 0.410820823222} N2 14 1 7 {} {0.13296207336 0.446577613787 0.673116070991} N3 15 1 1 {} {0.360015839468 0.490243393944 0.373221537253} H1 16 1 1 {} {0.335480692092 0.567726017014 0.401268020969} H2 17 1 1 {} {0.368451320043 0.590081627626 0.596498244284} H3 18 1 1 {} {0.369711462714 0.380662079934 0.521231678148} H4 19 1 1 {} {0.360378523808 0.403585190617 0.634232125629} H5 20 1 1 {} {0.408769051213 0.432631664222 0.578009238565} H6 21 1 1 {} {0.496119260097 0.543085116108 0.412305252388} H7 22 1 1 {} {0.462475116765 0.486324989983 0.352600061431} H8 23 1 1 {} {0.463702631667 0.485265845659 0.469592725305} H9 24 1 1 {} {0.442528477225 0.646558224131 0.524379518839} H10 25 1 1 {} {0.444330395135 0.632584347126 0.302677460087} H11 26 1 1 {} {0.230384801542 0.526911188414 0.634948965847} H12 27 1 1 {} {0.210654161182 0.507826876246 0.479258823994} H13 28 1 1 {} {0.167606186312 0.326535208189 0.688420506272} H14 29 1 1 {} {0.203526250522 0.422576576414 0.762149510667} H15 30 1 1 {} {0.278020404617 0.310852284493 0.549336175802} H16 31 1 1 {} {0.198984245284 0.279137874561 0.544759927578} H17 32 1 1 {} {0.259771798774 0.368923601511 0.38290061648} H18 33 1 1 {} {0.204840099947 0.355601854717 0.376850785605} H19 34 1 1 {} {0.132790127888 0.494178399069 0.69685448301} H20 35 1 1 {} {0.110296508582 0.440589836468 0.623320851336} H21 36 1 6 {} {0.581541955509 0.352035034268 0.308630558111} C4 37 1 14 {} {0.577373841795 0.384817807622 0.425907218221} Si6 38 1 14 {} {0.565571764354 0.262976777982 0.290652167259} Si7 39 1 8 {} {0.606014073206 0.336280404659 0.49379101672} O5 40 1 8 {} {0.599229474721 0.460506468177 0.430492766183} O6 41 1 6 {} {0.519165187915 0.390849842277 0.463696672125} C5 42 1 6 {} {0.50467683534 0.252331618662 0.267074514873} C6 43 1 8 {} {0.580738978781 0.224297693544 0.384945343991} O7 44 1 8 {} {0.595239211578 0.225916862822 0.210800370534} O8 45 1 14 {} {0.643077194707 0.50531557393 0.459175280157} Si8 46 1 7 {} {0.627526519021 0.586360696593 0.486430378475} N4 47 1 14 {} {0.634187430711 0.614233776043 0.596714374843} Si9 48 1 14 {} {0.60368112261 0.6401554357 0.407522454014} Si10 49 1 7 {} {0.614790298819 0.620893170944 0.297683975147} N5 50 1 7 {} {0.68691700221 0.633990920534 0.633149383121} N6 51 1 1 {} {0.562118593863 0.383777094409 0.262622603441} H22 52 1 1 {} {0.616853869604 0.357163559406 0.288996887367} H23 53 1 1 {} {0.603867855576 0.289283722115 0.476203158662} H24 54 1 1 {} {0.501040609639 0.422222401495 0.417285013034} H25 55 1 1 {} {0.516556206368 0.41508926526 0.528990356308} H26 56 1 1 {} {0.500914704745 0.343549277116 0.465186020972} H27 57 1 1 {} {0.495364100101 0.199215666357 0.262457897014} H28 58 1 1 {} {0.495410059241 0.276451863588 0.203697221228} H29 59 1 1 {} {0.484260268992 0.275166901158 0.319871986174} H30 60 1 1 {} {0.583555821524 0.175959996675 0.382715789372} H31 61 1 1 {} {0.582073518397 0.221908553717 0.152042256568} H32 62 1 1 {} {0.665141977388 0.476675465201 0.539956299937} H33 63 1 1 {} {0.674831126372 0.505055491282 0.382585041459} H34 64 1 1 {} {0.60655005115 0.676219074331 0.60325952317} H35 65 1 1 {} {0.617707009821 0.561196878119 0.658254330404} H36 66 1 1 {} {0.553875742931 0.639324765855 0.41486320564} H37 67 1 1 {} {0.620648205065 0.709059310063 0.425300309134} H38 68 1 1 {} {0.598449691037 0.58243781209 0.267547898724} H39 69 1 1 {} {0.646404467812 0.624431730439 0.273359562198} H40 70 1 1 {} {0.70822951899 0.596759126387 0.650840179702} H41 71 1 1 {} {0.703806469698 0.673026184978 0.605836660026} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end