iterations/neb0_image07_iter2.sci output for 43: 3.6A-->1.6A 715(amd-3) Si-CH2H...H2HC-Si two dimer closed (TSS)
Status: finished#MD System 2.0 @Title neb0_image07 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.360313162421 0.531001277207 0.423228607672} C1 1 1 14 {} {0.341274676409 0.497998501823 0.534285500638} Si1 2 1 14 {} {0.415553454882 0.573123581759 0.419040731997} Si2 3 1 8 {} {0.344515527103 0.558270955616 0.609550006605} O1 4 1 8 {} {0.28835620561 0.476010758337 0.526349093238} O2 5 1 6 {} {0.3729102618 0.422033130583 0.569679201337} C2 6 1 6 {} {0.464610740015 0.515545729325 0.412770293245} C3 7 1 8 {} {0.417151900091 0.617539305086 0.514139799585} O3 8 1 8 {} {0.415873860262 0.624007479668 0.331255531803} O4 9 1 14 {} {0.236025095668 0.481623289619 0.556958131821} Si3 10 1 7 {} {0.216375423791 0.402903598183 0.588390571143} N1 11 1 14 {} {0.18033915731 0.398548955326 0.680234091207} Si4 12 1 14 {} {0.231980228624 0.332892181573 0.52445445889} Si5 13 1 7 {} {0.233198731553 0.345258090451 0.410838417238} N2 14 1 7 {} {0.132832601425 0.446883591681 0.673054129815} N3 15 1 1 {} {0.359864344518 0.490568612429 0.37319496272} H1 16 1 1 {} {0.335380436654 0.568173704569 0.401229868859} H2 17 1 1 {} {0.368302536188 0.59040386934 0.596493983163} H3 18 1 1 {} {0.369589373997 0.381035296347 0.521180972955} H4 19 1 1 {} {0.360235574499 0.403976491073 0.634182816628} H5 20 1 1 {} {0.408622339024 0.433010527376 0.577972467842} H6 21 1 1 {} {0.496405212437 0.543166597968 0.411994651301} H7 22 1 1 {} {0.463195978573 0.484932622914 0.351794857908} H8 23 1 1 {} {0.465580700892 0.481378092138 0.470193488182} H9 24 1 1 {} {0.442409665287 0.64684517816 0.524426134137} H10 25 1 1 {} {0.444216940689 0.632816870833 0.302486499633} H11 26 1 1 {} {0.230236783442 0.527268587675 0.634972200419} H12 27 1 1 {} {0.210500433775 0.508167346968 0.479260843951} H13 28 1 1 {} {0.167447389474 0.326852565117 0.688368187641} H14 29 1 1 {} {0.20337479219 0.422887181539 0.762135980113} H15 30 1 1 {} {0.277905799312 0.311202987527 0.549364347231} H16 31 1 1 {} {0.198845980832 0.279473922961 0.54472946935} H17 32 1 1 {} {0.259631725781 0.369259632322 0.382899061831} H18 33 1 1 {} {0.204723418828 0.355923644576 0.376831815372} H19 34 1 1 {} {0.132634617788 0.494469451097 0.696835531612} H20 35 1 1 {} {0.110159001846 0.440948397541 0.623290030887} H21 36 1 6 {} {0.581649049219 0.351657702207 0.308636530281} C4 37 1 14 {} {0.57686985948 0.385220100333 0.425623272154} Si6 38 1 14 {} {0.565697870375 0.262570329145 0.290727188158} Si7 39 1 8 {} {0.605500445434 0.336153402761 0.493643560344} O5 40 1 8 {} {0.599520941804 0.46026550269 0.430642332892} O6 41 1 6 {} {0.517625035225 0.393907609267 0.462241839256} C5 42 1 6 {} {0.504795709952 0.251966743755 0.267087640382} C6 43 1 8 {} {0.580979118111 0.223939749274 0.384998971609} O7 44 1 8 {} {0.59541551936 0.225574744089 0.210839024025} O8 45 1 14 {} {0.643250341849 0.505109143431 0.45929567819} Si8 46 1 7 {} {0.627753468873 0.586191879914 0.486361585202} N4 47 1 14 {} {0.634009629263 0.613742241766 0.596678741307} Si9 48 1 14 {} {0.60386991722 0.639846292286 0.406901924987} Si10 49 1 7 {} {0.614860316372 0.620801698815 0.297306597892} N5 50 1 7 {} {0.687024059705 0.63355261832 0.632829618541} N6 51 1 1 {} {0.562233391732 0.383425466219 0.262693605433} H22 52 1 1 {} {0.61697620062 0.356803106133 0.289046840686} H23 53 1 1 {} {0.603947527736 0.289013697434 0.476160969993} H24 54 1 1 {} {0.49851851801 0.42686916372 0.417704411963} H25 55 1 1 {} {0.51640257781 0.415405536668 0.529769324779} H26 56 1 1 {} {0.500830964121 0.345014294724 0.464635478215} H27 57 1 1 {} {0.495458977174 0.198863390159 0.262431171025} H28 58 1 1 {} {0.495565259684 0.276149105265 0.203711494492} H29 59 1 1 {} {0.484373304795 0.27489532561 0.319815007259} H30 60 1 1 {} {0.58363628251 0.175592942064 0.382752551314} H31 61 1 1 {} {0.582206690431 0.221563190321 0.152118457143} H32 62 1 1 {} {0.665255844208 0.476296433095 0.539938386587} H33 63 1 1 {} {0.674982513537 0.504682232894 0.382650012441} H34 64 1 1 {} {0.606730498641 0.675998598176 0.603476610656} H35 65 1 1 {} {0.617875957002 0.560825839698 0.658703693131} H36 66 1 1 {} {0.554133697767 0.63893137269 0.41506667282} H37 67 1 1 {} {0.620798705817 0.708621513275 0.425589945453} H38 68 1 1 {} {0.598604540148 0.582055659871 0.267791137766} H39 69 1 1 {} {0.646542197803 0.624112650344 0.273497397498} H40 70 1 1 {} {0.708392177464 0.596399234025 0.650885103662} H41 71 1 1 {} {0.703970785611 0.672705812356 0.605766794384} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end