iterations/neb0_image07_iter3.sci output for 43: 3.6A-->1.6A 715(amd-3) Si-CH2H...H2HC-Si two dimer closed (TSS)
Status: finished#MD System 2.0 @Title neb0_image07 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.360353178447 0.530940870792 0.423233569658} C1 1 1 14 {} {0.341250877787 0.497931350387 0.534318452696} Si1 2 1 14 {} {0.415540568824 0.57324827528 0.418954146245} Si2 3 1 8 {} {0.344544108681 0.558211489671 0.609541474112} O1 4 1 8 {} {0.288411649991 0.475971302387 0.526346281991} O2 5 1 6 {} {0.372939296289 0.421966306545 0.569691199352} C2 6 1 6 {} {0.464159789123 0.516391409502 0.412842224899} C3 7 1 8 {} {0.417176607255 0.617450369608 0.514152879182} O3 8 1 8 {} {0.415864194182 0.623975669438 0.331211836808} O4 9 1 14 {} {0.23602287778 0.481519422169 0.556984659615} Si3 10 1 7 {} {0.216401067419 0.402847908948 0.588396181144} N1 11 1 14 {} {0.180365526674 0.39852061262 0.680204785046} Si4 12 1 14 {} {0.231996116001 0.332846921679 0.524420427457} Si5 13 1 7 {} {0.233223324241 0.345205418316 0.410842479136} N2 14 1 7 {} {0.132854643507 0.446834471951 0.673073955321} N3 15 1 1 {} {0.359883834515 0.490506775825 0.373197090021} H1 16 1 1 {} {0.335406822802 0.568106800605 0.401236366038} H2 17 1 1 {} {0.368326741877 0.590353304517 0.596497478901} H3 18 1 1 {} {0.369609321518 0.380974191089 0.521188857804} H4 19 1 1 {} {0.360258740618 0.403915002002 0.634186112283} H5 20 1 1 {} {0.408647707715 0.432946803256 0.577979637945} H6 21 1 1 {} {0.496413421448 0.543093476571 0.412053686896} H7 22 1 1 {} {0.463111344389 0.485030998071 0.351769060011} H8 23 1 1 {} {0.4652996301 0.482039019272 0.470023750721} H9 24 1 1 {} {0.442431704591 0.646797956694 0.524418130055} H10 25 1 1 {} {0.444238751133 0.632776005547 0.302513403242} H11 26 1 1 {} {0.230262611674 0.527214982578 0.634969690458} H12 27 1 1 {} {0.210525566804 0.508116545904 0.479254261919} H13 28 1 1 {} {0.167472430966 0.326788727547 0.688379230413} H14 29 1 1 {} {0.20339962132 0.422834912387 0.76214617188} H15 30 1 1 {} {0.277928262315 0.311141624542 0.549361380148} H16 31 1 1 {} {0.198869107045 0.279415757769 0.544737812887} H17 32 1 1 {} {0.259651798548 0.369201980608 0.382904832353} H18 33 1 1 {} {0.20474495165 0.355869224728 0.376840804061} H19 34 1 1 {} {0.132661240991 0.494415808671 0.696837533363} H20 35 1 1 {} {0.110182348624 0.440887450382 0.623293350838} H21 36 1 6 {} {0.581635750155 0.351739712447 0.308633295911} C4 37 1 14 {} {0.57676901095 0.38507110067 0.425795981604} Si6 38 1 14 {} {0.565676214616 0.262621793451 0.290722624507} Si7 39 1 8 {} {0.605542058915 0.336210957078 0.49362555324} O5 40 1 8 {} {0.599515252666 0.460422958724 0.430601945583} O6 41 1 6 {} {0.517900693547 0.393354788593 0.461960941365} C5 42 1 6 {} {0.504777321282 0.252036890593 0.26708123261} C6 43 1 8 {} {0.580939156359 0.224004876825 0.384980205736} O7 44 1 8 {} {0.59538333381 0.225637554188 0.210841653289} O8 45 1 14 {} {0.643253989349 0.505107391861 0.459344836941} Si8 46 1 7 {} {0.627638903771 0.586244835877 0.485974470342} N4 47 1 14 {} {0.634231700253 0.61394048643 0.596947418489} Si9 48 1 14 {} {0.603842831687 0.639910370015 0.407459802441} Si10 49 1 7 {} {0.614873770649 0.620781014242 0.297192829709} N5 50 1 7 {} {0.686901840287 0.633577197076 0.632821649216} N6 51 1 1 {} {0.562212173066 0.383482823281 0.262670526} H22 52 1 1 {} {0.616954290423 0.356860128421 0.289038620192} H23 53 1 1 {} {0.603926006184 0.289084912158 0.476160314944} H24 54 1 1 {} {0.499075289751 0.42584046853 0.417996585726} H25 55 1 1 {} {0.516402332452 0.415440811355 0.529766690034} H26 56 1 1 {} {0.500853336633 0.344967442706 0.464678928315} H27 57 1 1 {} {0.495441609536 0.198918867432 0.262434780682} H28 58 1 1 {} {0.495541418033 0.27619602988 0.203714457211} H29 59 1 1 {} {0.48435530995 0.274939643497 0.319823721675} H30 60 1 1 {} {0.583622538652 0.175650855301 0.382747249359} H31 61 1 1 {} {0.582184676994 0.221620193262 0.152105723797} H32 62 1 1 {} {0.665230740625 0.476363775081 0.539913663038} H33 63 1 1 {} {0.674952142182 0.504753551169 0.382634106855} H34 64 1 1 {} {0.606681936053 0.676046447741 0.603435658441} H35 65 1 1 {} {0.617831801364 0.560864292782 0.658646217416} H36 66 1 1 {} {0.554099142681 0.638988961383 0.41501387124} H37 67 1 1 {} {0.620770706029 0.7086716956 0.425512244302} H38 68 1 1 {} {0.59856276417 0.582091829736 0.267716695997} H39 69 1 1 {} {0.646542628898 0.624175571543 0.273448560607} H40 70 1 1 {} {0.708347703238 0.59649399213 0.650850541348} H41 71 1 1 {} {0.703931806984 0.672722955648 0.605789508234} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end