iterations/neb0_image07_iter5.sci output for 43: 3.6A-->1.6A 715(amd-3) Si-CH2H...H2HC-Si two dimer closed (TSS)
Status: finished#MD System 2.0 @Title neb0_image07 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.360353338464 0.530938127114 0.42323591569} C1 1 1 14 {} {0.341261537159 0.497931767063 0.534315202722} Si1 2 1 14 {} {0.415511431406 0.573283299015 0.41895671476} Si2 3 1 8 {} {0.344544677488 0.558208388568 0.609543524383} O1 4 1 8 {} {0.288399764215 0.475965187365 0.526349574508} O2 5 1 6 {} {0.372939266589 0.421963747153 0.569691437461} C2 6 1 6 {} {0.464186516042 0.51636136056 0.412780671543} C3 7 1 8 {} {0.417178175903 0.617453733884 0.514160718819} O3 8 1 8 {} {0.415862825369 0.623985755931 0.331194100361} O4 9 1 14 {} {0.236029807709 0.481521642441 0.556979822916} Si3 10 1 7 {} {0.216402095441 0.402841727629 0.588395414514} N1 11 1 14 {} {0.180366679892 0.398514457295 0.680210828244} Si4 12 1 14 {} {0.23199844785 0.332840224264 0.524422669363} Si5 13 1 7 {} {0.2332232532 0.345203270667 0.410840521942} N2 14 1 7 {} {0.132855076055 0.44683051503 0.673071534144} N3 15 1 1 {} {0.359885426014 0.490503777818 0.373197086828} H1 16 1 1 {} {0.335408086086 0.568101719505 0.401236834326} H2 17 1 1 {} {0.368328497807 0.590350078196 0.596496514277} H3 18 1 1 {} {0.369610507952 0.380970351454 0.521189222675} H4 19 1 1 {} {0.360260236623 0.40391065427 0.634187362139} H5 20 1 1 {} {0.408649293749 0.432943500153 0.577979994838} H6 21 1 1 {} {0.496399420874 0.543094671238 0.412057767281} H7 22 1 1 {} {0.463100399489 0.485073408664 0.351821475423} H8 23 1 1 {} {0.465277134991 0.482080216538 0.470022020523} H9 24 1 1 {} {0.442430869799 0.646793078061 0.524416844478} H10 25 1 1 {} {0.444237838194 0.632773740742 0.302517094398} H11 26 1 1 {} {0.230263907826 0.527210791012 0.63496909612} H12 27 1 1 {} {0.210527252662 0.508112491966 0.479255141647} H13 28 1 1 {} {0.167474203777 0.326787636587 0.688379136089} H14 29 1 1 {} {0.20340098637 0.422831949629 0.762144814905} H15 30 1 1 {} {0.277928545294 0.311138968226 0.549360820278} H16 31 1 1 {} {0.198870499035 0.279413286216 0.544737642835} H17 32 1 1 {} {0.25965385518 0.36919925985 0.382903978439} H18 33 1 1 {} {0.20474625358 0.355866039161 0.376840881173} H19 34 1 1 {} {0.1326626392 0.494414831332 0.69683850964} H20 35 1 1 {} {0.110183963724 0.440884293974 0.623294717927} H21 36 1 6 {} {0.581633025068 0.351739862626 0.308636680735} C4 37 1 14 {} {0.576802429644 0.38509066055 0.425775034298} Si6 38 1 14 {} {0.565675277281 0.262629649238 0.290719475127} Si7 39 1 8 {} {0.605548598015 0.336208410961 0.49363283235} O5 40 1 8 {} {0.599499150212 0.460394803083 0.430600427024} O6 41 1 6 {} {0.517925373467 0.393326667851 0.4621058194} C5 42 1 6 {} {0.504776067202 0.252037807376 0.267082283262} C6 43 1 8 {} {0.580937078914 0.224005373907 0.384982119019} O7 44 1 8 {} {0.595381763207 0.225639617742 0.210838984357} O8 45 1 14 {} {0.643250610191 0.505119156098 0.459330998176} Si8 46 1 7 {} {0.627650133825 0.586241072054 0.486048084063} N4 47 1 14 {} {0.634199263882 0.613925558098 0.596895444881} Si9 48 1 14 {} {0.60383955025 0.63991033364 0.407386327294} Si10 49 1 7 {} {0.614864381181 0.620797060198 0.29724624293} N5 50 1 7 {} {0.686934034877 0.633593841581 0.632835223961} N6 51 1 1 {} {0.562211139007 0.383486429223 0.262670172425} H22 52 1 1 {} {0.616953741913 0.356864213186 0.289038790144} H23 53 1 1 {} {0.60392592465 0.28908546932 0.476161260764} H24 54 1 1 {} {0.49907546286 0.425838173761 0.41792915073} H25 55 1 1 {} {0.516407651592 0.415417192932 0.529705740347} H26 56 1 1 {} {0.500850045929 0.344929059735 0.464684865437} H27 57 1 1 {} {0.495440937869 0.198923247335 0.262435152536} H28 58 1 1 {} {0.495539730339 0.276199510866 0.203712987234} H29 59 1 1 {} {0.484354096794 0.274942280605 0.319824436367} H30 60 1 1 {} {0.583621771386 0.175656060913 0.382747023141} H31 61 1 1 {} {0.582183686698 0.221623532514 0.152106153393} H32 62 1 1 {} {0.665231150352 0.476366672818 0.539920324406} H33 63 1 1 {} {0.674951676152 0.504755667713 0.382635321118} H34 64 1 1 {} {0.606682947967 0.676046234385 0.603434499979} H35 65 1 1 {} {0.617832393656 0.560871008976 0.658638634401} H36 66 1 1 {} {0.554095056944 0.638994127454 0.415014165261} H37 67 1 1 {} {0.620770058876 0.708680943282 0.425513552225} H38 68 1 1 {} {0.598561400676 0.582091944954 0.26771228663} H39 69 1 1 {} {0.646544604442 0.624176650897 0.273444184627} H40 70 1 1 {} {0.708343082395 0.596499557318 0.65085041935} H41 71 1 1 {} {0.70392596099 0.672720522483 0.605795598801} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end