iterations/neb0_image08_iter2.sci output for 43: 3.6A-->1.6A 715(amd-3) Si-CH2H...H2HC-Si two dimer closed (TSS)
Status: finished#MD System 2.0 @Title neb0_image08 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.362154821785 0.526183012905 0.423497140236} C1 1 1 14 {} {0.343116407807 0.493180586571 0.534552776535} Si1 2 1 14 {} {0.417394953746 0.568308000857 0.419305556694} Si2 3 1 8 {} {0.346357344468 0.553452375014 0.609817754902} O1 4 1 8 {} {0.290197860441 0.471191862335 0.526616976002} O2 5 1 6 {} {0.374752040431 0.417215557681 0.569946966034} C2 6 1 6 {} {0.466437727712 0.510756787673 0.413036805476} C3 7 1 8 {} {0.418993706789 0.612720686534 0.514408323549} O3 8 1 8 {} {0.417714810393 0.619191366166 0.331522303567} O4 9 1 14 {} {0.237866905932 0.476805625217 0.557225699518} Si3 10 1 7 {} {0.218217343456 0.398085780781 0.588658457107} N1 11 1 14 {} {0.182180630941 0.393731085924 0.680502663238} Si4 12 1 14 {} {0.233821982389 0.328074179771 0.52472245812} Si5 13 1 7 {} {0.235040496284 0.340439394999 0.411106223268} N2 14 1 7 {} {0.134674314823 0.442065052929 0.673321949179} N3 15 1 1 {} {0.361706081116 0.485750726377 0.373462803551} H1 16 1 1 {} {0.337222250052 0.563355819117 0.40149775089} H2 17 1 1 {} {0.370144329785 0.585586079088 0.596761836661} H3 18 1 1 {} {0.371431112195 0.376217326445 0.521448847519} H4 19 1 1 {} {0.362077396796 0.399158585021 0.634450685858} H5 20 1 1 {} {0.410464078055 0.428192595124 0.578240459473} H6 21 1 1 {} {0.498246709135 0.538348052966 0.412263631265} H7 22 1 1 {} {0.465034886004 0.480118993262 0.352060395938} H8 23 1 1 {} {0.467413001956 0.476579024286 0.47046139648} H9 24 1 1 {} {0.444251460485 0.642027390308 0.524693873301} H10 25 1 1 {} {0.44605872502 0.627999052531 0.302754748463} H11 26 1 1 {} {0.232078567273 0.522450683223 0.63524010185} H12 27 1 1 {} {0.212342234939 0.503349430116 0.479528712181} H13 28 1 1 {} {0.169289200205 0.322034699515 0.688636054872} H14 29 1 1 {} {0.205216576888 0.418069274187 0.762403827611} H15 30 1 1 {} {0.279747615076 0.306385105375 0.549632254062} H16 31 1 1 {} {0.200687734563 0.274656046059 0.54499732918} H17 32 1 1 {} {0.261473496046 0.36444179112 0.383166908395} H18 33 1 1 {} {0.206565214359 0.351105711674 0.377099715269} H19 34 1 1 {} {0.134476339085 0.489651445245 0.697103403176} H20 35 1 1 {} {0.112000772444 0.436130528189 0.623557960651} H21 36 1 6 {} {0.579807113221 0.356475801759 0.308367723517} C4 37 1 14 {} {0.575026535915 0.390034395035 0.42535951019} Si6 38 1 14 {} {0.563856300611 0.267387820097 0.290460391394} Si7 39 1 8 {} {0.603659940803 0.340970963913 0.49337546738} O5 40 1 8 {} {0.597679054239 0.465084652192 0.430374078194} O6 41 1 6 {} {0.515794839494 0.398704890169 0.461972025292} C5 42 1 6 {} {0.502953842721 0.256784827007 0.266819477484} C6 43 1 8 {} {0.579137971046 0.228757540226 0.384730849712} O7 44 1 8 {} {0.593573872095 0.230393350941 0.210571117661} O8 45 1 14 {} {0.641408806118 0.509926573733 0.459028940359} Si8 46 1 7 {} {0.625911656342 0.591009934516 0.486093517838} N4 47 1 14 {} {0.632168140065 0.618560351218 0.596410330277} Si9 48 1 14 {} {0.602028379989 0.644664805338 0.40663436889} Si10 49 1 7 {} {0.613018453941 0.625619351117 0.297038671262} N5 50 1 7 {} {0.685182231641 0.638370759672 0.63256176051} N6 51 1 1 {} {0.560391571468 0.388243479171 0.262425352802} H22 52 1 1 {} {0.615134437656 0.361621176935 0.288778825855} H23 53 1 1 {} {0.602105719705 0.293831868336 0.475893180963} H24 54 1 1 {} {0.496692422146 0.431657651472 0.417439906266} H25 55 1 1 {} {0.514561451712 0.42022298152 0.529501827349} H26 56 1 1 {} {0.498989910656 0.349830380026 0.464368467051} H27 57 1 1 {} {0.493617113576 0.203681397111 0.262163271128} H28 58 1 1 {} {0.493723415286 0.280967045617 0.203443520394} H29 59 1 1 {} {0.482531570398 0.279713279712 0.319547242628} H30 60 1 1 {} {0.581794500145 0.180410857516 0.38248462755} H31 61 1 1 {} {0.5803648952 0.226381187023 0.151850549379} H32 62 1 1 {} {0.663414013277 0.481114461897 0.53967048689} H33 63 1 1 {} {0.673140713706 0.509500304646 0.382382106277} H34 64 1 1 {} {0.604888668177 0.680816596978 0.603208695958} H35 65 1 1 {} {0.616034173037 0.56564386535 0.6584357673} H36 66 1 1 {} {0.552291726336 0.643749187142 0.414798727389} H37 67 1 1 {} {0.618956859919 0.713439469977 0.425322039956} H38 68 1 1 {} {0.596762811317 0.586873686823 0.267523135536} H39 69 1 1 {} {0.644700367572 0.628930691196 0.273229511734} H40 70 1 1 {} {0.706550350733 0.601217238077 0.650617186831} H41 71 1 1 {} {0.702129008613 0.677523791258 0.60549890042} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end