iterations/neb0_image08_iter21.sci output for 43: 3.6A-->1.6A 715(amd-3) Si-CH2H...H2HC-Si two dimer closed (TSS)
Status: finished#MD System 2.0 @Title neb0_image08 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.362026980232 0.525537728058 0.423558694287} C1 1 1 14 {} {0.343445385304 0.492042340625 0.534767118472} Si1 2 1 14 {} {0.415795538787 0.572024995209 0.417613945523} Si2 3 1 8 {} {0.346798628836 0.552295063203 0.609901377787} O1 4 1 8 {} {0.29064271164 0.46988337664 0.526666829369} O2 5 1 6 {} {0.375178742768 0.41613782888 0.569977201766} C2 6 1 6 {} {0.464600414872 0.516543344548 0.410939383487} C3 7 1 8 {} {0.418614147691 0.613037490329 0.515918653481} O3 8 1 8 {} {0.416381065423 0.6221728423 0.328393013902} O4 9 1 14 {} {0.238228066893 0.475607376597 0.557249391681} Si3 10 1 7 {} {0.218632304558 0.396927912291 0.58871912405} N1 11 1 14 {} {0.182621423094 0.392650719832 0.680622319095} Si4 12 1 14 {} {0.23422943081 0.326919522947 0.524687704561} Si5 13 1 7 {} {0.235460194238 0.339200921558 0.411050793748} N2 14 1 7 {} {0.135060506418 0.440939046637 0.673483428731} N3 15 1 1 {} {0.362298669302 0.485031288596 0.373545169714} H1 16 1 1 {} {0.33687622009 0.562079694629 0.401418679295} H2 17 1 1 {} {0.370558412428 0.584516329593 0.596853389535} H3 18 1 1 {} {0.371830020252 0.375094771002 0.521569733996} H4 19 1 1 {} {0.362511988927 0.398057487115 0.634500891223} H5 20 1 1 {} {0.410878700638 0.427073084 0.578304093676} H6 21 1 1 {} {0.49773676167 0.539845783532 0.412637092077} H7 22 1 1 {} {0.46262144474 0.483515277968 0.352292653765} H8 23 1 1 {} {0.461986457553 0.485559480195 0.470926530777} H9 24 1 1 {} {0.444668865841 0.641224153121 0.524718451364} H10 25 1 1 {} {0.446222937505 0.627194551721 0.303358465587} H11 26 1 1 {} {0.232527015401 0.521355096323 0.635213529148} H12 27 1 1 {} {0.212789952837 0.502283232658 0.479518528516} H13 28 1 1 {} {0.169756720127 0.320987613239 0.688780679192} H14 29 1 1 {} {0.205673642287 0.417077982527 0.762468199645} H15 30 1 1 {} {0.280166678599 0.305291463251 0.549630335113} H16 31 1 1 {} {0.201086016166 0.273561915762 0.545075147646} H17 32 1 1 {} {0.261870267455 0.363364362268 0.38322521252} H18 33 1 1 {} {0.206965544641 0.350047192356 0.377178166092} H19 34 1 1 {} {0.134906870197 0.488582317988 0.697129468952} H20 35 1 1 {} {0.112415848381 0.435028210937 0.623627246131} H21 36 1 6 {} {0.579690517648 0.357453037449 0.307974060094} C4 37 1 14 {} {0.577160823037 0.388565362496 0.426279051804} Si6 38 1 14 {} {0.563461583161 0.268459391141 0.290319966362} Si7 39 1 8 {} {0.606571244119 0.34065121148 0.494123243307} O5 40 1 8 {} {0.597028929096 0.465879044687 0.430326363366} O6 41 1 6 {} {0.51846301994 0.391375896901 0.465264870646} C5 42 1 6 {} {0.502562418438 0.257923132472 0.26678105167} C6 43 1 8 {} {0.578763813714 0.229851326432 0.384568040007} O7 44 1 8 {} {0.593169843721 0.231667939072 0.210392376228} O8 45 1 14 {} {0.640772045506 0.510742713331 0.459000509858} Si8 46 1 7 {} {0.625390068293 0.591840200176 0.486069128108} N4 47 1 14 {} {0.631934273571 0.619725151039 0.596457538925} Si9 48 1 14 {} {0.601531707334 0.645675262249 0.407021962353} Si10 49 1 7 {} {0.612749155832 0.626138345868 0.297552029765} N5 50 1 7 {} {0.684748777768 0.639714058315 0.633103059292} N6 51 1 1 {} {0.560030112547 0.389419529618 0.262623099566} H22 52 1 1 {} {0.614832418312 0.362694886162 0.288148586167} H23 53 1 1 {} {0.602091862545 0.293879788463 0.476304845987} H24 54 1 1 {} {0.502497946242 0.4212591749 0.413652481706} H25 55 1 1 {} {0.515209794067 0.419079780823 0.529398064879} H26 56 1 1 {} {0.499734517111 0.343902099227 0.467523130461} H27 57 1 1 {} {0.493252874527 0.204785819296 0.26218067117} H28 58 1 1 {} {0.493255009724 0.282006085165 0.203405379161} H29 59 1 1 {} {0.482150880838 0.280697758262 0.319628955674} H30 60 1 1 {} {0.581482117254 0.181509406107 0.382395008599} H31 61 1 1 {} {0.579941566481 0.227498729409 0.151720248244} H32 62 1 1 {} {0.662965883316 0.482200297093 0.539597323663} H33 63 1 1 {} {0.672605429971 0.510569815816 0.38232690937} H34 64 1 1 {} {0.604441420833 0.681731189651 0.602771817479} H35 65 1 1 {} {0.615606651628 0.566805973524 0.657738298577} H36 66 1 1 {} {0.551718458993 0.644893189429 0.414514130183} H37 67 1 1 {} {0.618494628456 0.714615128094 0.424915260511} H38 68 1 1 {} {0.596303671263 0.5881336239 0.267221070766} H39 69 1 1 {} {0.644170732723 0.63004690421 0.273160673653} H40 70 1 1 {} {0.706184100599 0.602269157732 0.650579439353} H41 71 1 1 {} {0.701799093634 0.678774085702 0.605526993079} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end