iterations/neb0_image08_iter26.sci output for 43: 3.6A-->1.6A 715(amd-3) Si-CH2H...H2HC-Si two dimer closed (TSS)
Status: finished#MD System 2.0 @Title neb0_image08 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.362135059102 0.525908526383 0.423436334002} C1 1 1 14 {} {0.343468495957 0.492159473269 0.534745135075} Si1 2 1 14 {} {0.415960262351 0.572101484247 0.417472214431} Si2 3 1 8 {} {0.346785203926 0.552301303289 0.609978796923} O1 4 1 8 {} {0.290555402573 0.469867326237 0.526714533692} O2 5 1 6 {} {0.375179217736 0.416126421936 0.569965268354} C2 6 1 6 {} {0.464662843784 0.516046065317 0.411307924797} C3 7 1 8 {} {0.418454297866 0.613499940697 0.515158623565} O3 8 1 8 {} {0.416321427871 0.622543108663 0.328860639844} O4 9 1 14 {} {0.238286820008 0.475592950629 0.557216092606} Si3 10 1 7 {} {0.218623025015 0.396932271783 0.588701232333} N1 11 1 14 {} {0.18261769646 0.392679888015 0.680615047188} Si4 12 1 14 {} {0.234222888871 0.326935215558 0.524680952904} Si5 13 1 7 {} {0.23545549891 0.339203078841 0.41105335134} N2 14 1 7 {} {0.135073544481 0.440937152236 0.67347357982} N3 15 1 1 {} {0.362344453661 0.485209956306 0.373538021712} H1 16 1 1 {} {0.336484075315 0.562044038134 0.401313551902} H2 17 1 1 {} {0.37054975502 0.584513647245 0.596891884345} H3 18 1 1 {} {0.371834057849 0.375086742359 0.521554408042} H4 19 1 1 {} {0.36250856761 0.398080507912 0.634479248191} H5 20 1 1 {} {0.410893966578 0.427068937367 0.578288033688} H6 21 1 1 {} {0.497835716372 0.540435743805 0.412444585616} H7 22 1 1 {} {0.462613116645 0.483338218186 0.351937093867} H8 23 1 1 {} {0.462306694163 0.484547576621 0.471275248807} H9 24 1 1 {} {0.444570078205 0.641250346217 0.524874616917} H10 25 1 1 {} {0.445889282773 0.6273508848 0.303365940579} H11 26 1 1 {} {0.232528627199 0.521342755585 0.635197371601} H12 27 1 1 {} {0.212790356853 0.50227392679 0.479506586303} H13 28 1 1 {} {0.169754678374 0.320953871963 0.688804260021} H14 29 1 1 {} {0.205677579512 0.417083130579 0.762465209789} H15 30 1 1 {} {0.280167586383 0.305283289189 0.549626032886} H16 31 1 1 {} {0.2010818737 0.27354393057 0.545075283506} H17 32 1 1 {} {0.261861687511 0.363353043707 0.383233433805} H18 33 1 1 {} {0.206972890568 0.350041578257 0.377184405044} H19 34 1 1 {} {0.134909003974 0.488561411115 0.697116718717} H20 35 1 1 {} {0.112430383492 0.435024598473 0.623657383819} H21 36 1 6 {} {0.579833948928 0.35732006226 0.308143353762} C4 37 1 14 {} {0.57675469116 0.388398030772 0.427101063944} Si6 38 1 14 {} {0.563497788231 0.268433351963 0.290225986508} Si7 39 1 8 {} {0.607169535105 0.340395012431 0.493502446566} O5 40 1 8 {} {0.597008659292 0.465408818245 0.430452214353} O6 41 1 6 {} {0.518070276485 0.392096344663 0.464837444056} C5 42 1 6 {} {0.502553914313 0.257903587231 0.266801082784} C6 43 1 8 {} {0.57875271237 0.229858604367 0.38458109663} O7 44 1 8 {} {0.593186154187 0.23161962045 0.210332544711} O8 45 1 14 {} {0.640936090172 0.51086602355 0.459110175533} Si8 46 1 7 {} {0.625299497537 0.591943401158 0.485771527744} N4 47 1 14 {} {0.632069818508 0.619833145934 0.596507800834} Si9 48 1 14 {} {0.601535683455 0.645690046092 0.407244821024} Si10 49 1 7 {} {0.612692439857 0.626222081872 0.297644707043} N5 50 1 7 {} {0.684846374569 0.63969633436 0.633012098698} N6 51 1 1 {} {0.560062622337 0.389473816969 0.262985737497} H22 52 1 1 {} {0.615015654313 0.362617241798 0.287692911007} H23 53 1 1 {} {0.602337606544 0.293603286571 0.476654988223} H24 54 1 1 {} {0.501713763824 0.422161390016 0.413460124645} H25 55 1 1 {} {0.515217394691 0.418399519437 0.528941143438} H26 56 1 1 {} {0.50033508455 0.343767653301 0.468219001324} H27 57 1 1 {} {0.493271734456 0.204788887204 0.262184494673} H28 58 1 1 {} {0.493249722544 0.282015283232 0.20341740448} H29 59 1 1 {} {0.482153694683 0.280708974338 0.319630677008} H30 60 1 1 {} {0.581489479938 0.18152654181 0.382405967696} H31 61 1 1 {} {0.579938677725 0.22748893324 0.15169227476} H32 62 1 1 {} {0.662930396373 0.48217165912 0.539538795649} H33 63 1 1 {} {0.672543540559 0.510530327875 0.382374999361} H34 64 1 1 {} {0.604421967894 0.681784528055 0.602752302985} H35 65 1 1 {} {0.615573187156 0.56667588413 0.657909927258} H36 66 1 1 {} {0.551753496671 0.644887376102 0.414524660964} H37 67 1 1 {} {0.618479872791 0.714522675751 0.424914538751} H38 68 1 1 {} {0.59619636143 0.587960364636 0.267073498758} H39 69 1 1 {} {0.644336016924 0.630083129614 0.273068659638} H40 70 1 1 {} {0.706080052665 0.60248688862 0.650473074696} H41 71 1 1 {} {0.701717938726 0.678565127565 0.605693698956} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end