iterations/neb0_image08_iter5.sci output for 43: 3.6A-->1.6A 715(amd-3) Si-CH2H...H2HC-Si two dimer closed (TSS)
Status: finished#MD System 2.0 @Title neb0_image08 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.362214482352 0.526052219859 0.423525742324} C1 1 1 14 {} {0.343123531779 0.49305479945 0.534565945356} Si1 2 1 14 {} {0.417321674778 0.568544214005 0.419131918575} Si2 3 1 8 {} {0.346411849805 0.553309547632 0.609810155079} O1 4 1 8 {} {0.290260922934 0.471052572947 0.52662016899} O2 5 1 6 {} {0.374803655615 0.417096892558 0.569957843003} C2 6 1 6 {} {0.465606285224 0.512372738342 0.41296664866} C3 7 1 8 {} {0.419043612555 0.612555436513 0.514455044404} O3 8 1 8 {} {0.417696106428 0.619182953611 0.331415966734} O4 9 1 14 {} {0.237895685168 0.476652167506 0.557241575926} Si3 10 1 7 {} {0.218270746117 0.397968635218 0.588668335695} N1 11 1 14 {} {0.182222224758 0.393638593898 0.680502387093} Si4 12 1 14 {} {0.233862747245 0.327959921722 0.524697654578} Si5 13 1 7 {} {0.235088472891 0.340298926239 0.411106523654} N2 14 1 7 {} {0.134716550228 0.44193575201 0.673343288022} N3 15 1 1 {} {0.361748353269 0.485628227423 0.373466717753} H1 16 1 1 {} {0.337273958673 0.563224751863 0.401508388361} H2 17 1 1 {} {0.370192382155 0.585475684732 0.596766514985} H3 18 1 1 {} {0.371473704164 0.376092357701 0.521460780482} H4 19 1 1 {} {0.362126540201 0.399034629355 0.634456973995} H5 20 1 1 {} {0.410512755956 0.428066585826 0.578254968449} H6 21 1 1 {} {0.498235093191 0.538203106706 0.412367625603} H7 22 1 1 {} {0.464855030084 0.480392890254 0.352070098466} H8 23 1 1 {} {0.466798588309 0.477895598339 0.470262607294} H9 24 1 1 {} {0.444294453006 0.64191914923 0.524681923655} H10 25 1 1 {} {0.446101015245 0.627900474084 0.302802381397} H11 26 1 1 {} {0.232128785361 0.522334472392 0.635240518841} H12 27 1 1 {} {0.212392507494 0.503235956706 0.479524898464} H13 28 1 1 {} {0.169339991905 0.321912171605 0.688649854258} H14 29 1 1 {} {0.205265887414 0.417955629265 0.762415294563} H15 30 1 1 {} {0.279794479935 0.306263289562 0.549632731981} H16 31 1 1 {} {0.200734097743 0.274537676606 0.545008014315} H17 32 1 1 {} {0.261516796482 0.364323842934 0.383175515242} H18 33 1 1 {} {0.206611848778 0.350988261916 0.377113323583} H19 34 1 1 {} {0.134525223987 0.489531299696 0.697107701514} H20 35 1 1 {} {0.112047889446 0.436008599501 0.623566232417} H21 36 1 6 {} {0.579763208464 0.356622600624 0.30834095557} C4 37 1 14 {} {0.574928847612 0.389842933734 0.425620407938} Si6 38 1 14 {} {0.563817051268 0.267494740239 0.290480635638} Si7 39 1 8 {} {0.603734415262 0.341070489287 0.493360596609} O5 40 1 8 {} {0.59762013531 0.46529591003 0.430317544949} O6 41 1 6 {} {0.516450510931 0.397522170177 0.461882444898} C5 42 1 6 {} {0.502908957397 0.256919693305 0.266803970731} C6 43 1 8 {} {0.579096112413 0.22887795049 0.384705583537} O7 44 1 8 {} {0.593521846271 0.230541726302 0.210566277219} O8 45 1 14 {} {0.641393359113 0.509981465547 0.459094712772} Si8 46 1 7 {} {0.625785577769 0.591121923472 0.485773213041} N4 47 1 14 {} {0.632341781232 0.618808197934 0.596606636216} Si9 48 1 14 {} {0.601982139794 0.644803759311 0.407121324189} Si10 49 1 7 {} {0.61299773628 0.625667831164 0.296976709002} N5 50 1 7 {} {0.685069072298 0.638478975497 0.632565689853} N6 51 1 1 {} {0.560344350722 0.38836779297 0.262384298998} H22 52 1 1 {} {0.615089115015 0.361747268601 0.28876378103} H23 53 1 1 {} {0.602061379063 0.293966753203 0.47589381299} H24 54 1 1 {} {0.497747660591 0.429710966377 0.417728256901} H25 55 1 1 {} {0.514573762794 0.420250130737 0.529396091278} H26 56 1 1 {} {0.499005126953 0.349693743156 0.46445237993} H27 57 1 1 {} {0.493573055685 0.203803901881 0.262163498763} H28 58 1 1 {} {0.493672850458 0.281077952194 0.203437932165} H29 59 1 1 {} {0.482490913022 0.279820526425 0.319557085014} H30 60 1 1 {} {0.581757271511 0.180531289907 0.382474834721} H31 61 1 1 {} {0.580318804751 0.226503733896 0.151836127799} H32 62 1 1 {} {0.663365490961 0.481246551284 0.539652123855} H33 63 1 1 {} {0.673086117622 0.509637915456 0.382365103453} H34 64 1 1 {} {0.604816792249 0.680925991336 0.603162303909} H35 65 1 1 {} {0.615968028059 0.565752767692 0.658365353026} H36 66 1 1 {} {0.552224615378 0.643867751042 0.414741083977} H37 67 1 1 {} {0.61890357947 0.713561179505 0.425242331663} H38 68 1 1 {} {0.596697843838 0.586970933548 0.267435967248} H39 69 1 1 {} {0.644678116093 0.629058132937 0.273172929535} H40 70 1 1 {} {0.706476650243 0.601380160857 0.650578181474} H41 71 1 1 {} {0.702061762679 0.677600489368 0.60552385642} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end