iterations/neb0_image08_iter7.sci output for 43: 3.6A-->1.6A 715(amd-3) Si-CH2H...H2HC-Si two dimer closed (TSS)
Status: finished#MD System 2.0 @Title neb0_image08 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.362287775631 0.525879835083 0.423555790886} C1 1 1 14 {} {0.343204411235 0.492887453584 0.534565669169} Si1 2 1 14 {} {0.416821135662 0.569326826642 0.418996214212} Si2 3 1 8 {} {0.346493884264 0.553108040724 0.609816047908} O1 4 1 8 {} {0.290274074395 0.470818887295 0.526642685958} O2 5 1 6 {} {0.374870737375 0.416912678953 0.569968479615} C2 6 1 6 {} {0.465193867036 0.513424753931 0.412296538458} C3 7 1 8 {} {0.419112911492 0.612391012733 0.514581552679} O3 8 1 8 {} {0.417647643447 0.619301711675 0.331103966062} O4 9 1 14 {} {0.23798161759 0.476463719801 0.557238656464} Si3 10 1 7 {} {0.218343762461 0.397772520885 0.5886853611} N1 11 1 14 {} {0.182292818084 0.39346481704 0.680528117489} Si4 12 1 14 {} {0.233937976152 0.327755622742 0.524687648023} Si5 13 1 7 {} {0.235158067577 0.340095012223 0.411084117342} N2 14 1 7 {} {0.134772278217 0.441755779643 0.673368083144} N3 15 1 1 {} {0.361816746021 0.485449463813 0.373473487183} H1 16 1 1 {} {0.337346982209 0.56301099481 0.401527467247} H2 17 1 1 {} {0.370260942138 0.585294439974 0.596767532675} H3 18 1 1 {} {0.371539311414 0.375904651561 0.521481958089} H4 19 1 1 {} {0.362202594793 0.398844004532 0.63446884829} H5 20 1 1 {} {0.41058868286 0.427880274584 0.578275713628} H6 21 1 1 {} {0.498036197459 0.538074623068 0.412516932982} H7 22 1 1 {} {0.464519379137 0.481214116341 0.352702031777} H8 23 1 1 {} {0.46585863525 0.479875271388 0.469882198771} H9 24 1 1 {} {0.444340597913 0.641734753306 0.524656317276} H10 25 1 1 {} {0.446146336298 0.627751492065 0.302890096019} H11 26 1 1 {} {0.232204410046 0.522151562503 0.635236956618} H12 27 1 1 {} {0.212469529615 0.503058194892 0.479523829259} H13 28 1 1 {} {0.169419286138 0.321740317188 0.688667496674} H14 29 1 1 {} {0.205341098201 0.41778460577 0.762424298478} H15 30 1 1 {} {0.279859704028 0.306083349678 0.549631429186} H16 31 1 1 {} {0.200804431849 0.274361919584 0.545020826807} H17 32 1 1 {} {0.261583414921 0.364143211134 0.383188070816} H18 33 1 1 {} {0.206682869356 0.350808888593 0.377132250577} H19 34 1 1 {} {0.13459906474 0.48934570152 0.697112413068} H20 35 1 1 {} {0.112119532388 0.435822934469 0.62357999512} H21 36 1 6 {} {0.579688579318 0.356812119132 0.308360926178} C4 37 1 14 {} {0.575269614697 0.389759524442 0.425648476307} Si6 38 1 14 {} {0.56375183732 0.267707561381 0.290458849006} Si7 39 1 8 {} {0.60390314479 0.341166811564 0.49342791222} O5 40 1 8 {} {0.59739177517 0.465297598092 0.430250043411} O6 41 1 6 {} {0.517293113836 0.396144549479 0.463291564209} C5 42 1 6 {} {0.502842551666 0.257100603003 0.26680329949} C6 43 1 8 {} {0.579036053745 0.229044373865 0.384700063047} O7 44 1 8 {} {0.593444886866 0.23075640716 0.210537767032} O8 45 1 14 {} {0.641330179754 0.510150289956 0.459048414291} Si8 46 1 7 {} {0.625713998506 0.591244380561 0.485905581244} N4 47 1 14 {} {0.632303287955 0.619010532382 0.596494558443} Si9 48 1 14 {} {0.601891481921 0.644964142133 0.407161130346} Si10 49 1 7 {} {0.61291246499 0.625856202144 0.297250859221} N5 50 1 7 {} {0.685133197984 0.638734616482 0.632662230558} N6 51 1 1 {} {0.560271147787 0.388562721913 0.262325658734} H22 52 1 1 {} {0.615021203861 0.361945943234 0.288747338089} H23 53 1 1 {} {0.602008419115 0.294121559834 0.475903853853} H24 54 1 1 {} {0.498933484328 0.427539589946 0.417352556105} H25 55 1 1 {} {0.514660412841 0.420010631778 0.528656680963} H26 56 1 1 {} {0.498969608123 0.349027478231 0.464647551639} H27 57 1 1 {} {0.49350720979 0.203999330137 0.262164631159} H28 58 1 1 {} {0.493594815833 0.281254631434 0.203417102863} H29 59 1 1 {} {0.482426852098 0.2799843486 0.319569498612} H30 60 1 1 {} {0.581701882321 0.180716351347 0.382461929431} H31 61 1 1 {} {0.580251334468 0.226692150957 0.151828297157} H32 62 1 1 {} {0.663307286634 0.481435137848 0.539690839009} H33 63 1 1 {} {0.673010307125 0.509832198466 0.38235964123} H34 64 1 1 {} {0.604734190645 0.681073414416 0.603099343308} H35 65 1 1 {} {0.615890343639 0.565952064465 0.658228745993} H36 66 1 1 {} {0.552116506556 0.644062132029 0.414677207274} H37 67 1 1 {} {0.618831504905 0.713794219479 0.425162599821} H38 68 1 1 {} {0.596605587777 0.58710866469 0.267309352239} H39 69 1 1 {} {0.6446476774 0.629236315738 0.273085853638} H40 70 1 1 {} {0.706357864775 0.601622340706 0.650534979638} H41 71 1 1 {} {0.701945452217 0.677711936855 0.605581884382} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end