iterations/neb0_image08_iter9.sci output for 43: 3.6A-->1.6A 715(amd-3) Si-CH2H...H2HC-Si two dimer closed (TSS)
Status: finished#MD System 2.0 @Title neb0_image08 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.362332907939 0.525734440403 0.423580732678} C1 1 1 14 {} {0.343245445113 0.492732580373 0.534575362092} Si1 2 1 14 {} {0.416547006495 0.569831113092 0.418825622216} Si2 3 1 8 {} {0.346562351645 0.552937364766 0.6098170001} O1 4 1 8 {} {0.290327648248 0.470633027523 0.526651397648} O2 5 1 6 {} {0.374930906031 0.416760950658 0.569978125941} C2 6 1 6 {} {0.464635408018 0.51469041712 0.411943015926} C3 7 1 8 {} {0.419153738642 0.612256705852 0.51470606044} O3 8 1 8 {} {0.417584144451 0.61941602202 0.330847813369} O4 9 1 14 {} {0.238032109797 0.476292426715 0.557247641051} Si3 10 1 7 {} {0.218406722579 0.397613268398 0.588698581412} N1 11 1 14 {} {0.182350685726 0.39332687328 0.68054038065} Si4 12 1 14 {} {0.233996201408 0.327594236407 0.524673010051} Si5 13 1 7 {} {0.235218381512 0.339920070884 0.411075764575} N2 14 1 7 {} {0.134823418746 0.441597357474 0.673392437783} N3 15 1 1 {} {0.361877386226 0.485304761186 0.37348132896} H1 16 1 1 {} {0.337397868273 0.562833105163 0.401541497524} H2 17 1 1 {} {0.370319402011 0.585146101597 0.596772085032} H3 18 1 1 {} {0.371594191029 0.375746558568 0.521498646741} H4 19 1 1 {} {0.362265408315 0.398685276854 0.634478364779} H5 20 1 1 {} {0.410650296165 0.427722396453 0.578292025793} H6 21 1 1 {} {0.497930715287 0.537986590714 0.412632587386} H7 22 1 1 {} {0.464247212358 0.481747516616 0.352968215033} H8 23 1 1 {} {0.465079400141 0.481468691071 0.469649633338} H9 24 1 1 {} {0.444390849276 0.641594357455 0.524639915847} H10 25 1 1 {} {0.446195294324 0.627627701583 0.302956565629} H11 26 1 1 {} {0.232267963001 0.521999791575 0.635234927167} H12 27 1 1 {} {0.212533774025 0.502910422024 0.479522409527} H13 28 1 1 {} {0.169485063426 0.321592383757 0.688683878982} H14 29 1 1 {} {0.205404189044 0.417641369849 0.762434646574} H15 30 1 1 {} {0.279916847939 0.305930601462 0.549631038698} H16 31 1 1 {} {0.200863056499 0.274212560196 0.545032513086} H17 32 1 1 {} {0.261639280944 0.363992504483 0.383197926934} H18 33 1 1 {} {0.206740777736 0.350659508802 0.377146510992} H19 34 1 1 {} {0.134660767301 0.489193683692 0.69711766101} H20 35 1 1 {} {0.112178442751 0.43566750169 0.62358907963} H21 36 1 6 {} {0.579633374777 0.356979622445 0.308344559394} C4 37 1 14 {} {0.575430192766 0.389601355991 0.425775429968} Si6 38 1 14 {} {0.563698885567 0.26786835752 0.290458015864} Si7 39 1 8 {} {0.604066461454 0.341238212277 0.493475001816} O5 40 1 8 {} {0.597269746544 0.465433875558 0.43020242703} O6 41 1 6 {} {0.517967954491 0.394886517715 0.463851743296} C5 42 1 6 {} {0.502786368771 0.257261616434 0.266794200918} C6 43 1 8 {} {0.57898403416 0.229195098839 0.384681639882} O7 44 1 8 {} {0.593381770875 0.230939830581 0.210523488933} O8 45 1 14 {} {0.641268332552 0.510251226761 0.459048546183} Si8 46 1 7 {} {0.625620499315 0.591359638127 0.485832363612} N4 47 1 14 {} {0.632361226941 0.619227855725 0.596539905471} Si9 48 1 14 {} {0.601819454594 0.645118828857 0.407397932053} Si10 49 1 7 {} {0.612870462167 0.625947255628 0.297310978904} N5 50 1 7 {} {0.68506901521 0.638910454603 0.632719720367} N6 51 1 1 {} {0.560212418815 0.388722553107 0.262286192719} H22 52 1 1 {} {0.614962913988 0.362108732491 0.288726558773} H23 53 1 1 {} {0.601964643579 0.294252602061 0.475915367247} H24 54 1 1 {} {0.500021588992 0.425557474363 0.417248368375} H25 55 1 1 {} {0.514715858319 0.419919504549 0.528359336591} H26 56 1 1 {} {0.498974778611 0.348559026978 0.464832886342} H27 57 1 1 {} {0.493451948263 0.204158077138 0.262165516392} H28 58 1 1 {} {0.49352991648 0.281399606703 0.203406039734} H29 59 1 1 {} {0.482373741164 0.280121555315 0.319580885751} H30 60 1 1 {} {0.581655631555 0.180866359134 0.382450015606} H31 61 1 1 {} {0.580192806253 0.226849119478 0.151812555414} H32 62 1 1 {} {0.66325270111 0.48159567382 0.539699649669} H33 63 1 1 {} {0.67294433647 0.509997453291 0.382346378641} H34 64 1 1 {} {0.604659000596 0.681202414142 0.603043056581} H35 65 1 1 {} {0.615820627752 0.566111765326 0.658121464533} H36 66 1 1 {} {0.552029069546 0.644220776225 0.414619880772} H37 67 1 1 {} {0.618768070481 0.713971741638 0.425086404703} H38 68 1 1 {} {0.596536612547 0.587257495571 0.267229512248} H39 69 1 1 {} {0.6445977018 0.62939041718 0.273037122813} H40 70 1 1 {} {0.706281351076 0.601797492714 0.650509416241} H41 71 1 1 {} {0.701873208944 0.677846484276 0.605599324914} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end